RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	RRP12	Q12754	1228 aa	Known RBP	12.51	□□□□□ -0.41
NPL3	YDR432W	HSH49	Q99181	213 aa	Predicted RBP	12.51	□□□□□ -0.41
NPL3	YDR432W	CMD1	P06787	147 aa	Known RBP	12.5	□□□□□ -0.41
NPL3	YDR432W	TPS2	P31688	896 aa	Known RBP	12.5	□□□□□ -0.41
NPL3	YDR432W	MF(ALPHA)2	P32435	120 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	PET309	P32522	965 aa	Predicted RBP	12.5	□□□□□ -0.41
NPL3	YDR432W	SKN1	P33336	771 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	EMC3	P36039	253 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	TRM7	P38238	310 aa	Known RBP	12.5	□□□□□ -0.41
NPL3	YDR432W	LYS1	P38998	373 aa	RIP-Chip data	12.5	□□□□□ -0.41	not detected
NPL3	YDR432W	LRO1	P40345	661 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	INA22	P40576	216 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	ROT1	Q03691	256 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	SIZ1	Q04195	904 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	RRN11	Q04712	507 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	PNP1	Q05788	311 aa		12.5	□□□□□ -0.41
NPL3	YDR432W	STT4	P37297	1900 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	SWI5	P08153	709 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	ERG20	P08524	352 aa	Known RBP	12.49	□□□□□ -0.41
NPL3	YDR432W	PEP5	P12868	1029 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	PDC5	P16467	563 aa	Known RBP	12.49	□□□□□ -0.41
NPL3	YDR432W	URA10	P30402	227 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	YPT52	P36018	234 aa	Known RBP	12.49	□□□□□ -0.41
NPL3	YDR432W	SPP381	P38282	291 aa	Predicted RBP	12.49	□□□□□ -0.41
NPL3	YDR432W	HST3	P53687	447 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	YOL073C	Q08232	322 aa		12.49	□□□□□ -0.41
NPL3	YDR432W	SPS1	P08458	490 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	YCR099C	P25657	155 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	TIP20	P33891	701 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	SQT1	P35184	431 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	YHR045W	P38775	560 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	YHR182W	P38870	785 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	ALA1	P40825	983 aa	Known RBP	12.48	□□□□□ -0.41
NPL3	YDR432W	ALK1	P43633	760 aa	Known RBP	12.48	□□□□□ -0.41
NPL3	YDR432W	PET130	P47065	347 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	ARE2	P53629	642 aa	Known RBP	12.48	□□□□□ -0.41
NPL3	YDR432W	ECM9	Q02202	377 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	YLR030W	Q07967	263 aa		12.48	□□□□□ -0.41
NPL3	YDR432W	RPB2	P08518	1224 aa	Known RBP	12.47	□□□□□ -0.41
NPL3	YDR432W	NSP1	P14907	823 aa	Known RBP	12.47	□□□□□ -0.41
NPL3	YDR432W	ATP12	P22135	325 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	RSC6	P25632	483 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	MEF2	P39677	819 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	COG6	P53959	839 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	ERF2	Q06551	359 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	GUP2	Q08929	609 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	DIN7	Q12086	430 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	TRA1	P38811	3744 aa		12.47	□□□□□ -0.41
NPL3	YDR432W	CDC20	P26309	610 aa		12.46	□□□□□ -0.41
NPL3	YDR432W	HSE1	P38753	452 aa		12.46	□□□□□ -0.41
NPL3	YDR432W	PTC2	P39966	464 aa	Known RBP	12.46	□□□□□ -0.41
NPL3	YDR432W	VID22	Q05934	901 aa		12.46	□□□□□ -0.41
NPL3	YDR432W	RSC3	Q06639	885 aa		12.46	□□□□□ -0.41
NPL3	YDR432W	CUE5	Q08412	411 aa	Known RBP	12.46	□□□□□ -0.41
NPL3	YDR432W	PTP1	P25044	335 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	URA7	P28274	579 aa	Known RBP	12.45	□□□□□ -0.42
NPL3	YDR432W	NFU1	P32860	256 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	YHR020W	P38708	688 aa	Known RBP	12.45	□□□□□ -0.42
NPL3	YDR432W	UBA4	P38820	440 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	SAP1	P39955	897 aa	Known RBP	12.45	□□□□□ -0.42
NPL3	YDR432W	SPG5	P42933	373 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	YFL012W	P43580	148 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	FRE7	Q12333	620 aa		12.45	□□□□□ -0.42
NPL3	YDR432W	MST1	P07236	462 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	FUM1	P08417	488 aa	Known RBP	12.44	□□□□□ -0.42
NPL3	YDR432W	HEM15	P16622	393 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	DEF1	P35732	738 aa	Known RBP	12.44	□□□□□ -0.42
NPL3	YDR432W	FAU1	P40099	211 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	RIM21	P48565	533 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	SPP2	Q02521	185 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	GPR1	Q12361	961 aa		12.44	□□□□□ -0.42
NPL3	YDR432W	TEF1	P02994	458 aa	Known RBP	12.43	□□□□□ -0.42
NPL3	YDR432W	FUR1	P18562	216 aa	Known RBP	12.43	□□□□□ -0.42
NPL3	YDR432W	SEC15	P22224	910 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	RPC37	P36121	282 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	VHS1	Q03785	461 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	TRM12	Q04235	462 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	YMR027W	Q04371	470 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	NUS1	Q12063	375 aa		12.43	□□□□□ -0.42
NPL3	YDR432W	HRP1	Q99383	534 aa	Known RBP	12.43	□□□□□ -0.42
NPL3	YDR432W	RAD1	P06777	1100 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	12.42	□□□□□ -0.42	not detected
NPL3	YDR432W	HOP1	P20050	605 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	YCR006C	P25350	157 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	ATP11	P32453	318 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	12.42	□□□□□ -0.42	not detected
NPL3	YDR432W	PFA3	P42836	336 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	SAE2	P46946	345 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	SYT1	Q06836	1226 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	NOP58	Q12499	511 aa	Known RBP	12.42	□□□□□ -0.42
NPL3	YDR432W	LAG2	Q92325	660 aa		12.42	□□□□□ -0.42
NPL3	YDR432W	ARG4	P04076	463 aa	Predicted RBP	12.41	□□□□□ -0.42
NPL3	YDR432W	ADH4	P10127	382 aa		12.41	□□□□□ -0.42
NPL3	YDR432W	MSB1	P21339	1137 aa	Known RBP	12.41	□□□□□ -0.42
NPL3	YDR432W	GDA1	P32621	518 aa		12.41	□□□□□ -0.42
NPL3	YDR432W	THI80	P35202	319 aa		12.41	□□□□□ -0.42
NPL3	YDR432W	RIM11	P38615	370 aa		12.41	□□□□□ -0.42
NPL3	YDR432W	MTG2	P38860	518 aa		12.41	□□□□□ -0.42
NPL3	YDR432W	CCT2	P39076	527 aa	Known RBP	12.41	□□□□□ -0.42
NPL3	YDR432W	MNN1	P39106	762 aa		12.41	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms