RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A PHM6Q05637 104 aa0.7□□□□□ -2.3
SDH6YDR379C-A CSR1Q06705 408 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A FMP45Q07651 309 aa0.7□□□□□ -2.3
SDH6YDR379C-A SUL2Q12325 893 aa0.7□□□□□ -2.3
SDH6YDR379C-A ARP7Q12406 477 aa0.7□□□□□ -2.3
SDH6YDR379C-A ATR1P13090 542 aa0.69□□□□□ -2.3
SDH6YDR379C-A SPO16P17122 198 aa0.69□□□□□ -2.3
SDH6YDR379C-A RIT1P23796 513 aa0.69□□□□□ -2.3
SDH6YDR379C-A CMK1P27466 446 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A GCD7P32502 381 aaPredicted RBP0.69□□□□□ -2.3
SDH6YDR379C-A SAC6P32599 642 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A VPS17P32913 551 aa0.69□□□□□ -2.3
SDH6YDR379C-A SIP2P34164 415 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A YBL059WP34224 193 aa0.69□□□□□ -2.3
SDH6YDR379C-A NTR2P36118 322 aaPredicted RBP0.69□□□□□ -2.3
SDH6YDR379C-A GEX2P36173 615 aa0.69□□□□□ -2.3
SDH6YDR379C-A FPR3P38911 411 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A STT3P39007 718 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A AXL1P40851 1208 aa0.69□□□□□ -2.3
SDH6YDR379C-A IMA1P53051 589 aa0.69□□□□□ -2.3
SDH6YDR379C-A SHY1P53266 389 aa0.69□□□□□ -2.3
SDH6YDR379C-A MSO1P53604 210 aaKnown RBP0.69□□□□□ -2.3
SDH6YDR379C-A WSC2P53832 503 aa0.69□□□□□ -2.3
SDH6YDR379C-A TSA2Q04120 196 aa0.69□□□□□ -2.3
SDH6YDR379C-A ATG26Q06321 1198 aa0.69□□□□□ -2.3
SDH6YDR379C-A VAM6Q07468 1049 aa0.69□□□□□ -2.3
SDH6YDR379C-A THI20Q08224 551 aa0.69□□□□□ -2.3
SDH6YDR379C-A SWT1Q12104 458 aa0.69□□□□□ -2.3
SDH6YDR379C-A TMS1Q12116 473 aa0.69□□□□□ -2.3
SDH6YDR379C-A RER1P25560 188 aa0.68□□□□□ -2.3
SDH6YDR379C-A SNC1P31109 117 aa0.68□□□□□ -2.3
SDH6YDR379C-A ECM15P35195 104 aa0.68□□□□□ -2.3
SDH6YDR379C-A TUL1P36096 758 aa0.68□□□□□ -2.3
SDH6YDR379C-A UBA4P38820 440 aa0.68□□□□□ -2.3
SDH6YDR379C-A YIL161WP40449 235 aaKnown RBP0.68□□□□□ -2.3
SDH6YDR379C-A COG6P53959 839 aa0.68□□□□□ -2.3
SDH6YDR379C-A SAM50P53969 484 aa0.68□□□□□ -2.3
SDH6YDR379C-A RSM28Q03430 361 aa0.68□□□□□ -2.3
SDH6YDR379C-A EIS1Q05050 843 aaKnown RBP0.68□□□□□ -2.3
SDH6YDR379C-A CRN1Q06440 651 aa0.68□□□□□ -2.3
SDH6YDR379C-A RDR1Q08904 546 aa0.68□□□□□ -2.3
SDH6YDR379C-A RRP6Q12149 733 aaKnown RBP0.68□□□□□ -2.3
SDH6YDR379C-A PDH1Q12428 516 aaKnown RBP0.68□□□□□ -2.3
SDH6YDR379C-A ADE3P07245 946 aaKnown RBP0.67□□□□□ -2.3
SDH6YDR379C-A SEC62P21825 274 aa0.67□□□□□ -2.3
SDH6YDR379C-A ARP2P32381 391 aaKnown RBP0.67□□□□□ -2.3
SDH6YDR379C-A PMU1P36069 295 aa0.67□□□□□ -2.3
SDH6YDR379C-A ARP1P38696 384 aa0.67□□□□□ -2.3
SDH6YDR379C-A FSH1P38777 243 aaKnown RBP0.67□□□□□ -2.3
SDH6YDR379C-A NPR2P39923 615 aa0.67□□□□□ -2.3
SDH6YDR379C-A PKP1P40530 394 aa0.67□□□□□ -2.3
SDH6YDR379C-A SWP82P43554 623 aa0.67□□□□□ -2.3
SDH6YDR379C-A YFR020WP43600 232 aa0.67□□□□□ -2.3
SDH6YDR379C-A SNG1P46950 547 aa0.67□□□□□ -2.3
SDH6YDR379C-A SMC3P47037 1230 aa0.67□□□□□ -2.3
SDH6YDR379C-A MAD3P47074 515 aa0.67□□□□□ -2.3
SDH6YDR379C-A CTF18P49956 741 aa0.67□□□□□ -2.3
SDH6YDR379C-A IST1P53843 298 aaPredicted RBP0.67□□□□□ -2.3
SDH6YDR379C-A YMR087WQ04299 284 aa0.67□□□□□ -2.3
SDH6YDR379C-A ADE13Q05911 482 aaKnown RBP0.67□□□□□ -2.3
SDH6YDR379C-A SSK1Q07084 712 aa0.67□□□□□ -2.3
SDH6YDR379C-A IWR1Q07532 353 aaPredicted RBP0.67□□□□□ -2.3
SDH6YDR379C-A ENT4Q07872 247 aa0.67□□□□□ -2.3
SDH6YDR379C-A YOL057WQ08225 711 aa0.67□□□□□ -2.3
SDH6YDR379C-A ERV2Q12284 196 aa0.67□□□□□ -2.3
SDH6YDR379C-A YBL111CQ3E7Y5 667 aa0.67□□□□□ -2.3
SDH6YDR379C-A HHF1P02309 103 aaKnown RBP0.66□□□□□ -2.3
SDH6YDR379C-A LPD1P09624 499 aaKnown RBP0.66□□□□□ -2.3
SDH6YDR379C-A AMD1P15274 810 aaKnown RBP0.66□□□□□ -2.3
SDH6YDR379C-A PGS1P25578 521 aa0.66□□□□□ -2.3
SDH6YDR379C-A FUN19P28003 413 aaPredicted RBP0.66□□□□□ -2.3
SDH6YDR379C-A ARO2P28777 376 aaKnown RBP0.66□□□□□ -2.3
SDH6YDR379C-A CBF2P32504 956 aa0.66□□□□□ -2.3
SDH6YDR379C-A TFC4P33339 1025 aa0.66□□□□□ -2.3
SDH6YDR379C-A ESL2P36168 1195 aa0.66□□□□□ -2.3
SDH6YDR379C-A ENP1P38333 483 aaKnown RBP0.66□□□□□ -2.3
SDH6YDR379C-A UBP12P39538 1254 aa0.66□□□□□ -2.3
SDH6YDR379C-A CSM2P40465 213 aa0.66□□□□□ -2.3
SDH6YDR379C-A ERR3P42222 437 aa0.66□□□□□ -2.3
SDH6YDR379C-A NNF2P53253 936 aa0.66□□□□□ -2.3
SDH6YDR379C-A ARK1P53974 638 aa0.66□□□□□ -2.3
SDH6YDR379C-A CEG1Q01159 459 aaPredicted RBP0.66□□□□□ -2.3
SDH6YDR379C-A YMR027WQ04371 470 aa0.66□□□□□ -2.3
SDH6YDR379C-A RRN11Q04712 507 aa0.66□□□□□ -2.3
SDH6YDR379C-A CIA1Q05583 330 aa0.66□□□□□ -2.3
SDH6YDR379C-A YRM1Q12340 786 aa0.66□□□□□ -2.3
SDH6YDR379C-A ADH2P00331 348 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A CAR1P00812 333 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A HXK2P04807 486 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A MIS1P09440 975 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A SNF3P10870 884 aa0.65□□□□□ -2.31
SDH6YDR379C-A RNA14P25298 677 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A SWI4P25302 1093 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A RVS161P25343 265 aaKnown RBP0.65□□□□□ -2.31
SDH6YDR379C-A PUT3P25502 979 aaPredicted RBP0.65□□□□□ -2.31
SDH6YDR379C-A YCR022CP25620 114 aa0.65□□□□□ -2.31
SDH6YDR379C-A SRB5P32585 307 aa0.65□□□□□ -2.31
SDH6YDR379C-A NUP120P35729 1037 aa0.65□□□□□ -2.31
SDH6YDR379C-A LAG1P38703 411 aa0.65□□□□□ -2.31
SDH6YDR379C-A VPS52P39904 641 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms