RNA–Protein interactions for RNA: YDR249C

YDR249C, Transcript of Putative protein of unknown function, yeast

Gene YDR249C, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR249C	YDR249C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
YDR249C	YDR249C	KRS1	P15180	591 aa	Known RBP	4.92	□□□□□ -1.62
YDR249C	YDR249C	ELO1	P39540	310 aa		4.92	□□□□□ -1.62
YDR249C	YDR249C	AFG3	P39925	761 aa		4.92	□□□□□ -1.62
YDR249C	YDR249C	FAR3	P46671	204 aa		4.92	□□□□□ -1.62
YDR249C	YDR249C	UBP8	P50102	471 aa		4.92	□□□□□ -1.62
YDR249C	YDR249C	ERG13	P54839	491 aa	Known RBP	4.92	□□□□□ -1.62
YDR249C	YDR249C	YMR085W	P0CF18	432 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	CKA1	P15790	372 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	CNA1	P23287	553 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	SSE2	P32590	693 aa	Known RBP	4.91	□□□□□ -1.62
YDR249C	YDR249C	SRO77	P38163	1010 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	VPS41	P38959	992 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	IRC8	P47046	822 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	VID30	P53076	958 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	YGR127W	P53275	312 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	YTP1	P53584	459 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	COP1	P53622	1201 aa	Known RBP	4.91	□□□□□ -1.62
YDR249C	YDR249C	ASI1	P54074	624 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	VTC3	Q02725	835 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	RIM13	Q03792	727 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	YLR287C	Q05881	355 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	BUD7	Q08754	746 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	RRI1	Q12468	440 aa		4.91	□□□□□ -1.62
YDR249C	YDR249C	LCB1	P25045	558 aa	Known RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	PUP3	P25451	205 aa	Known RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	NPL6	P32832	435 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	MIA40	P36046	403 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	TSC10	P38342	320 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	ULP2	P40537	1034 aa	Predicted RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	MET28	P40573	187 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	APT1	P49435	187 aa	Known RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	YML122C	Q03207	126 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	DPB4	Q04603	196 aa	Known RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	THI7	Q05998	598 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	UTP21	Q06078	939 aa	Predicted RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	RTT109	Q07794	436 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	FRE3	Q08905	711 aa		4.9	□□□□□ -1.63
YDR249C	YDR249C	HSH49	Q99181	213 aa	Predicted RBP	4.9	□□□□□ -1.63
YDR249C	YDR249C	GAL4	P04386	881 aa		4.89	□□□□□ -1.63
YDR249C	YDR249C	TOM71	P38825	639 aa	Known RBP	4.89	□□□□□ -1.63
YDR249C	YDR249C	LTP1	P40347	161 aa		4.89	□□□□□ -1.63
YDR249C	YDR249C	CFD1	P40558	293 aa		4.89	□□□□□ -1.63
YDR249C	YDR249C	CRC1	Q12289	327 aa		4.89	□□□□□ -1.63
YDR249C	YDR249C	FOB1	O13329	566 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	RED1	P14291	827 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	KGD1	P20967	1014 aa	Known RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	ROX1	P25042	368 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	IMG1	P25626	169 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	GAC1	P28006	793 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	YBR144C	P34215	104 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	SEF1	P34228	1148 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	NUP133	P36161	1157 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	DBP8	P38719	431 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	YEL057C	P39983	233 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	ROK1	P45818	564 aa	Predicted RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	LYS20	P48570	428 aa	Known RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	ERG26	P53199	349 aa	Known RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	BOP3	P53958	396 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	SYF1	Q04048	859 aa	Predicted RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	CAC2	Q04199	468 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	EMI2	Q04409	500 aa	Known RBP	4.88	□□□□□ -1.63
YDR249C	YDR249C	VPS38	Q05919	439 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	TEN1	Q07921	160 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	AVL9	Q12500	764 aa		4.88	□□□□□ -1.63
YDR249C	YDR249C	MET17	P06106	444 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	EST1	P17214	699 aa	Predicted RBP	4.87	□□□□□ -1.63
YDR249C	YDR249C	YAP1	P19880	650 aa	Known RBP	4.87	□□□□□ -1.63
YDR249C	YDR249C	BOS1	P25385	244 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	YBL055C	P34220	418 aa	Predicted RBP	4.87	□□□□□ -1.63
YDR249C	YDR249C	UBP11	P36026	717 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	RFC1	P38630	861 aa	Known RBP	4.87	□□□□□ -1.63
YDR249C	YDR249C	ALG5	P40350	334 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	MET18	P40469	1032 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	YIL024C	P40543	189 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YDR249C	YDR249C	PSA1	P41940	361 aa	Known RBP	4.87	□□□□□ -1.63
YDR249C	YDR249C	VTC2	P43585	828 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	PTR3	P43606	678 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	YNL144C	P53907	740 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	GRC3	Q07845	632 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	SFI1	Q12369	946 aa		4.87	□□□□□ -1.63
YDR249C	YDR249C	ARG81	P05085	880 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	FUR1	P18562	216 aa	Known RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	BUD5	P25300	642 aa	Predicted RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	ERG3	P32353	365 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	TIF3	P34167	436 aa	Known RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	TCD2	P36101	447 aa	Known RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	ICS2	P38284	255 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	MAF1	P41910	395 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	LGE1	Q02796	332 aa	Known RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	GIR2	Q03768	265 aa	Predicted RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	FIN1	Q03898	291 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	ATG26	Q06321	1198 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	PGA3	Q12746	312 aa	Known RBP	4.86	□□□□□ -1.63
YDR249C	YDR249C	SGS1	P35187	1447 aa		4.86	□□□□□ -1.63
YDR249C	YDR249C	PUT2	P07275	575 aa		4.85	□□□□□ -1.63
YDR249C	YDR249C	NFU1	P32860	256 aa		4.85	□□□□□ -1.63
YDR249C	YDR249C	YKL100C	P34248	587 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms