RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C TEF1P02994 458 aaKnown RBP6.22□□□□□ -1.41
CDC34YDR054C ADY2P25613 283 aa6.22□□□□□ -1.41
CDC34YDR054C CDC20P26309 610 aa6.22□□□□□ -1.41
CDC34YDR054C YME1P32795 747 aa6.22□□□□□ -1.41
CDC34YDR054C BCK2P33306 851 aa6.22□□□□□ -1.41
CDC34YDR054C RPC37P36121 282 aa6.22□□□□□ -1.41
CDC34YDR054C URA8P38627 578 aaPredicted RBP6.22□□□□□ -1.41
CDC34YDR054C MSC7P38694 644 aa6.22□□□□□ -1.41
CDC34YDR054C MSR1P38714 643 aa6.22□□□□□ -1.41
CDC34YDR054C OTU2P38747 307 aaKnown RBP6.22□□□□□ -1.41
CDC34YDR054C YAR028WP39548 234 aa6.22□□□□□ -1.41
CDC34YDR054C PRM9P39551 298 aa6.22□□□□□ -1.41
CDC34YDR054C EDC3P39998 551 aaKnown RBP6.22□□□□□ -1.41
CDC34YDR054C IRC6P43615 237 aa6.22□□□□□ -1.41
CDC34YDR054C NRD1P53617 575 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
CDC34YDR054C SHR3Q02774 210 aa6.22□□□□□ -1.41
CDC34YDR054C TAF11Q04226 346 aa6.22□□□□□ -1.41
CDC34YDR054C YMR027WQ04371 470 aa6.22□□□□□ -1.41
CDC34YDR054C PIG1Q06216 648 aa6.22□□□□□ -1.41
CDC34YDR054C RUD3Q12234 484 aaKnown RBP6.22□□□□□ -1.41
CDC34YDR054C GPM3Q12326 303 aa6.22□□□□□ -1.41
CDC34YDR054C NDJ1Q12366 352 aa6.22□□□□□ -1.41
CDC34YDR054C SEM1O94742 89 aa6.21□□□□□ -1.42
CDC34YDR054C QCR6P00127 147 aa6.21□□□□□ -1.42
CDC34YDR054C IMA3P0CW40 589 aa6.21□□□□□ -1.42
CDC34YDR054C IMA4P0CW41 589 aa6.21□□□□□ -1.42
CDC34YDR054C HSF1P10961 833 aa6.21□□□□□ -1.42
CDC34YDR054C DBP2P24783 546 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C ILV6P25605 309 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C PRO1P32264 428 aa6.21□□□□□ -1.42
CDC34YDR054C STB5P38699 743 aa6.21□□□□□ -1.42
CDC34YDR054C LAM1P38851 1228 aa6.21□□□□□ -1.42
CDC34YDR054C YEL028WP39989 153 aa6.21□□□□□ -1.42
CDC34YDR054C MEP1P40260 492 aa6.21□□□□□ -1.42
CDC34YDR054C JEM1P40358 645 aa6.21□□□□□ -1.42
CDC34YDR054C MND2P40577 368 aa6.21□□□□□ -1.42
CDC34YDR054C YFL012WP43580 148 aa6.21□□□□□ -1.42
CDC34YDR054C RPS10BP46784 105 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C SNG1P46950 547 aa6.21□□□□□ -1.42
CDC34YDR054C SAP4P53036 818 aa6.21□□□□□ -1.42
CDC34YDR054C ARC35P53731 342 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C TRM112P53738 135 aaPredicted RBP6.21□□□□□ -1.42
CDC34YDR054C VPS9P54787 451 aa6.21□□□□□ -1.42
CDC34YDR054C HAS1Q03532 505 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C HED1Q03937 162 aa6.21□□□□□ -1.42
CDC34YDR054C ARP9Q05123 467 aa6.21□□□□□ -1.42
CDC34YDR054C IMA2Q08295 589 aa6.21□□□□□ -1.42
CDC34YDR054C NRT1Q08485 598 aa6.21□□□□□ -1.42
CDC34YDR054C RPS10AQ08745 105 aaPredicted RBP6.21□□□□□ -1.42
CDC34YDR054C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
CDC34YDR054C EFG1Q3E705 233 aaKnown RBP6.21□□□□□ -1.42
CDC34YDR054C HIS1P00498 297 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C ILV2P07342 687 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C MET8P15807 274 aa6.2□□□□□ -1.42
CDC34YDR054C MIH1P23748 554 aa6.2□□□□□ -1.42
CDC34YDR054C KAR4P25583 335 aa6.2□□□□□ -1.42
CDC34YDR054C AAD3P25612 363 aa6.2□□□□□ -1.42
CDC34YDR054C URA7P28274 579 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C RAD5P32849 1169 aaPredicted RBP6.2□□□□□ -1.42
CDC34YDR054C TSA1P34760 196 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C YKR078WP36158 585 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C ECM13P38195 257 aa6.2□□□□□ -1.42
CDC34YDR054C YAT2P40017 923 aa6.2□□□□□ -1.42
CDC34YDR054C RIC1P40395 1056 aa6.2□□□□□ -1.42
CDC34YDR054C TRF5P48561 642 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C YAP1802P53309 568 aa6.2□□□□□ -1.42
CDC34YDR054C TIM10P87108 93 aa6.2□□□□□ -1.42
CDC34YDR054C SLU7Q02775 382 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C ADE13Q05911 482 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C BSP1Q06604 576 aa6.2□□□□□ -1.42
CDC34YDR054C YOR387CQ08910 206 aa6.2□□□□□ -1.42
CDC34YDR054C YPQ1Q12010 308 aa6.2□□□□□ -1.42
CDC34YDR054C SVS1Q12254 260 aa6.2□□□□□ -1.42
CDC34YDR054C LPX1Q12405 387 aaKnown RBP6.2□□□□□ -1.42
CDC34YDR054C GID7P25569 745 aa6.19□□□□□ -1.42
CDC34YDR054C YCL049CP25577 312 aa6.19□□□□□ -1.42
CDC34YDR054C PMI40P29952 429 aaKnown RBP6.19□□□□□ -1.42
CDC34YDR054C SMF2P38778 549 aa6.19□□□□□ -1.42
CDC34YDR054C SFB3P38810 929 aa6.19□□□□□ -1.42
CDC34YDR054C AXL2P38928 823 aa6.19□□□□□ -1.42
CDC34YDR054C VPS41P38959 992 aa6.19□□□□□ -1.42
CDC34YDR054C NUP60P39705 539 aa6.19□□□□□ -1.42
CDC34YDR054C YER158CP40095 573 aa6.19□□□□□ -1.42
CDC34YDR054C MMF1P40185 145 aaKnown RBP6.19□□□□□ -1.42
CDC34YDR054C DPH1P40487 425 aaKnown RBP6.19□□□□□ -1.42
CDC34YDR054C SAE2P46946 345 aa6.19□□□□□ -1.42
CDC34YDR054C TIM13P53299 105 aa6.19□□□□□ -1.42
CDC34YDR054C COQ6P53318 479 aa6.19□□□□□ -1.42
CDC34YDR054C GND2P53319 492 aa6.19□□□□□ -1.42
CDC34YDR054C YPR003CP53394 754 aa6.19□□□□□ -1.42
CDC34YDR054C RNT1Q02555 471 aa6.19□□□□□ -1.42
CDC34YDR054C VID22Q05934 901 aa6.19□□□□□ -1.42
CDC34YDR054C SWC7Q06707 132 aa6.19□□□□□ -1.42
CDC34YDR054C DIF1O13577 133 aa6.18□□□□□ -1.42
CDC34YDR054C CDC4P07834 779 aa6.18□□□□□ -1.42
CDC34YDR054C ILS1P09436 1072 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C ATP12P22135 325 aa6.18□□□□□ -1.42
CDC34YDR054C MET22P32179 357 aa6.18□□□□□ -1.42
CDC34YDR054C KES1P35844 434 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C MRPL16P38064 232 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms