RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	LCL3	P53153	274 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	IMO32	P53219	342 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	YGR151C	P53287	111 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	ARP5	P53946	755 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	APM1	Q00776	475 aa	Predicted RBP	4.91	□□□□□ -1.62
LDB17	YDL146W	MAK10	Q02197	733 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	DON1	Q05610	365 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	YFT2	Q06676	274 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	AIM41	Q12032	185 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	ATG29	Q12092	213 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	SPE4	Q12455	300 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	CHD1	P32657	1468 aa		4.91	□□□□□ -1.62
LDB17	YDL146W	RPL1A	P0CX43	217 aa	Known RBP	4.9	□□□□□ -1.62
LDB17	YDL146W	RPL1B	P0CX44	217 aa	Known RBP	4.9	□□□□□ -1.62
LDB17	YDL146W	SEC12	P11655	471 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	HOM2	P13663	365 aa	Known RBP	4.9	□□□□□ -1.62
LDB17	YDL146W	SYN8	P31377	255 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	EMP70	P32802	667 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	NIP100	P33420	868 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	LTV1	P34078	463 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	CTP1	P38152	299 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	STB5	P38699	743 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	AGX1	P43567	385 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	TAM41	P53230	385 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	YGR111W	P53265	400 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	RQC1	Q05468	723 aa	Known RBP	4.9	□□□□□ -1.62
LDB17	YDL146W	NOP6	Q07623	225 aa	Known RBP	4.9	□□□□□ -1.62
LDB17	YDL146W	YPT6	Q99260	215 aa		4.9	□□□□□ -1.62
LDB17	YDL146W	DBP3	P20447	523 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	FUB1	P25659	250 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	NTH1	P32356	751 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	GMH1	P36125	273 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	YSW1	P38280	609 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	HSM3	P38348	480 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	TIF5	P38431	405 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	SMC2	P38989	1170 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	VMA13	P41807	478 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	NUP84	P52891	726 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	RPN14	P53196	417 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	PDR16	P53860	351 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	RPA49	Q01080	415 aa	Predicted RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	KAP120	Q02932	1032 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	YML037C	Q03703	340 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	YDR239C	Q03780	787 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	SOV1	Q04748	898 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	STP3	Q05937	343 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	MRD1	Q06106	887 aa	Known RBP	4.89	□□□□□ -1.63
LDB17	YDL146W	YPR172W	Q06608	200 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	YDL086W	Q07505	273 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	DCI1	Q08558	271 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	BUD7	Q08754	746 aa		4.89	□□□□□ -1.63
LDB17	YDL146W	RPL6B	P05739	176 aa	Known RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	CLC1	P17891	233 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	PRE2	P30656	287 aa	Known RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	MSS1	P32559	526 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	SRB2	P34162	210 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	SEF1	P34228	1148 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	WSS1	P38838	269 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	CRG1	P38892	291 aa	RIP-Chip data	4.88	□□□□□ -1.63	not detected
LDB17	YDL146W	YDR089W	P38966	869 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	FTR1	P40088	404 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	PKP1	P40530	394 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
LDB17	YDL146W	LAM5	P43560	674 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	BPL1	P48445	690 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	ALT2	P52892	507 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	RPL6A	Q02326	176 aa	Known RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	COQ11	Q05892	277 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	VPS38	Q05919	439 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	PNO1	Q99216	274 aa	Known RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	RPN13	O13563	156 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	HNM1	P19807	563 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	PHO91	P27514	894 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	PMT1	P33775	817 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	CMC1	P36064	111 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	MRPL40	P36534	297 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	EHT1	P38295	451 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	YEL020C	P39994	560 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	YIL089W	P40500	205 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	IME4	P41833	600 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	DLD2	P46681	530 aa	Known RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	LYS4	P49367	693 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	MLC1	P53141	149 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	MTG1	Q03151	367 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	YSH1	Q06224	779 aa	Predicted RBP	4.88	□□□□□ -1.63
LDB17	YDL146W	YNL162W-A	Q3E7A8	72 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	YOR019W	Q99248	730 aa		4.88	□□□□□ -1.63
LDB17	YDL146W	EST1	P17214	699 aa	Predicted RBP	4.87	□□□□□ -1.63
LDB17	YDL146W	DAP2	P18962	818 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	RAD51	P25454	400 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	GDT1	P38301	280 aa	Predicted RBP	4.87	□□□□□ -1.63
LDB17	YDL146W	RRT2	P38332	387 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	KSP1	P38691	1029 aa	Known RBP	4.87	□□□□□ -1.63
LDB17	YDL146W	CCT6	P39079	546 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	CHS6	P40955	746 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	IDS2	P46958	469 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	CUE3	P53137	624 aa	Known RBP	4.87	□□□□□ -1.63
LDB17	YDL146W	TWF1	P53250	332 aa		4.87	□□□□□ -1.63
LDB17	YDL146W	PFK27	Q12471	397 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms