RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C SMC3P47037 1230 aa3.55□□□□□ -1.84
RRP42YDL111C BNA3P47039 444 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C ASN1P49089 572 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C LCL3P53153 274 aa3.55□□□□□ -1.84
RRP42YDL111C TWF1P53250 332 aa3.55□□□□□ -1.84
RRP42YDL111C YGR127WP53275 312 aa3.55□□□□□ -1.84
RRP42YDL111C EFM6P53970 246 aa3.55□□□□□ -1.84
RRP42YDL111C CIK1Q01649 594 aa3.55□□□□□ -1.84
RRP42YDL111C ERO1Q03103 563 aa3.55□□□□□ -1.84
RRP42YDL111C RQC1Q05468 723 aaKnown RBP3.55□□□□□ -1.84
RRP42YDL111C INP53Q12271 1107 aa3.55□□□□□ -1.84
RRP42YDL111C ILS1P09436 1072 aaKnown RBP3.54□□□□□ -1.84
RRP42YDL111C CLC1P17891 233 aa3.54□□□□□ -1.84
RRP42YDL111C SPE2P21182 396 aa3.54□□□□□ -1.84
RRP42YDL111C REC107P21651 314 aa3.54□□□□□ -1.84
RRP42YDL111C SAT4P25333 603 aaKnown RBP3.54□□□□□ -1.84
RRP42YDL111C SYN8P31377 255 aa3.54□□□□□ -1.84
RRP42YDL111C SEC66P33754 206 aa3.54□□□□□ -1.84
RRP42YDL111C SEF1P34228 1148 aa3.54□□□□□ -1.84
RRP42YDL111C CMC1P36064 111 aa3.54□□□□□ -1.84
RRP42YDL111C TCD2P36101 447 aaKnown RBP3.54□□□□□ -1.84
RRP42YDL111C JEM1P40358 645 aa3.54□□□□□ -1.84
RRP42YDL111C IRC8P47046 822 aa3.54□□□□□ -1.84
RRP42YDL111C RPS7BP48164 190 aaKnown RBP3.54□□□□□ -1.84
RRP42YDL111C MRD1Q06106 887 aaKnown RBP3.54□□□□□ -1.84
RRP42YDL111C ATG9Q12142 997 aa3.54□□□□□ -1.84
RRP42YDL111C YOL159C-AQ3E769 90 aa3.54□□□□□ -1.84
RRP42YDL111C GAL80P04387 435 aa3.53□□□□□ -1.84
RRP42YDL111C ADE5,7P07244 802 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C UGP1P32861 499 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C RPC34P32910 317 aa3.53□□□□□ -1.84
RRP42YDL111C WBP1P33767 430 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C ADE17P38009 592 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C LTP1P40347 161 aa3.53□□□□□ -1.84
RRP42YDL111C ALG5P40350 334 aa3.53□□□□□ -1.84
RRP42YDL111C DOT5P40553 215 aa3.53□□□□□ -1.84
RRP42YDL111C SGN1P40561 250 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
RRP42YDL111C SSU1P41930 458 aa3.53□□□□□ -1.84
RRP42YDL111C GAT1P43574 510 aa3.53□□□□□ -1.84
RRP42YDL111C PET130P47065 347 aa3.53□□□□□ -1.84
RRP42YDL111C APT1P49435 187 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C OGG1P53397 376 aaPredicted RBP3.53□□□□□ -1.84
RRP42YDL111C MAK10Q02197 733 aa3.53□□□□□ -1.84
RRP42YDL111C YLR345WQ06137 509 aa3.53□□□□□ -1.84
RRP42YDL111C RAD34Q06665 692 aa3.53□□□□□ -1.84
RRP42YDL111C CYK3Q07533 885 aa3.53□□□□□ -1.84
RRP42YDL111C LEU9Q12166 604 aaKnown RBP3.53□□□□□ -1.84
RRP42YDL111C SEC39Q12745 709 aa3.53□□□□□ -1.84
RRP42YDL111C PGK1P00560 416 aaKnown RBP3.52□□□□□ -1.85
RRP42YDL111C PET111P08468 800 aa3.52□□□□□ -1.85
RRP42YDL111C HEM1P09950 548 aaPredicted RBP3.52□□□□□ -1.85
RRP42YDL111C ERG11P10614 530 aa3.52□□□□□ -1.85
RRP42YDL111C MRP2P10663 115 aaPredicted RBP3.52□□□□□ -1.85
RRP42YDL111C STE12P13574 688 aa3.52□□□□□ -1.85
RRP42YDL111C PDA1P16387 420 aaKnown RBP3.52□□□□□ -1.85
RRP42YDL111C EST1P17214 699 aaPredicted RBP3.52□□□□□ -1.85
RRP42YDL111C PTP1P25044 335 aa3.52□□□□□ -1.85
RRP42YDL111C PRD1P25375 712 aa3.52□□□□□ -1.85
RRP42YDL111C PUP3P25451 205 aaKnown RBP3.52□□□□□ -1.85
RRP42YDL111C YMC1P32331 307 aa3.52□□□□□ -1.85
RRP42YDL111C GSH1P32477 678 aa3.52□□□□□ -1.85
RRP42YDL111C YBR144CP34215 104 aa3.52□□□□□ -1.85
RRP42YDL111C SAS3P34218 831 aa3.52□□□□□ -1.85
RRP42YDL111C MNN2P38069 597 aa3.52□□□□□ -1.85
RRP42YDL111C ELO1P39540 310 aa3.52□□□□□ -1.85
RRP42YDL111C EXO1P39875 702 aa3.52□□□□□ -1.85
RRP42YDL111C SGF73P53165 657 aa3.52□□□□□ -1.85
RRP42YDL111C FMP30Q02883 468 aa3.52□□□□□ -1.85
RRP42YDL111C YDR239CQ03780 787 aa3.52□□□□□ -1.85
RRP42YDL111C ERB1Q04660 807 aaKnown RBP3.52□□□□□ -1.85
RRP42YDL111C APL4Q12028 832 aa3.52□□□□□ -1.85
RRP42YDL111C ULA1Q12059 462 aa3.52□□□□□ -1.85
RRP42YDL111C YRF1-4O13559 1382 aa3.51□□□□□ -1.85
RRP42YDL111C BI2P03873 423 aa3.51□□□□□ -1.85
RRP42YDL111C APN1P22936 367 aa3.51□□□□□ -1.85
RRP42YDL111C STE50P25344 346 aa3.51□□□□□ -1.85
RRP42YDL111C AAD3P25612 363 aa3.51□□□□□ -1.85
RRP42YDL111C YCR051WP25631 222 aa3.51□□□□□ -1.85
RRP42YDL111C GSY2P27472 705 aa3.51□□□□□ -1.85
RRP42YDL111C PAP1P29468 568 aaKnown RBP3.51□□□□□ -1.85
RRP42YDL111C TIF3P34167 436 aaKnown RBP3.51□□□□□ -1.85
RRP42YDL111C GCS1P35197 352 aa3.51□□□□□ -1.85
RRP42YDL111C STB6P36085 766 aa3.51□□□□□ -1.85
RRP42YDL111C HXT14P42833 540 aa3.51□□□□□ -1.85
RRP42YDL111C BUD27P43573 796 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RRP42YDL111C YFR020WP43600 232 aa3.51□□□□□ -1.85
RRP42YDL111C IMD4P50094 524 aaKnown RBP3.51□□□□□ -1.85
RRP42YDL111C YMR178WQ03219 274 aaKnown RBP3.51□□□□□ -1.85
RRP42YDL111C DPB4Q04603 196 aaKnown RBP3.51□□□□□ -1.85
RRP42YDL111C VTA1Q06263 330 aa3.51□□□□□ -1.85
RRP42YDL111C THI3Q07471 609 aa3.51□□□□□ -1.85
RRP42YDL111C RLM1Q12224 676 aa3.51□□□□□ -1.85
RRP42YDL111C RTC1Q08281 1341 aa3.5□□□□□ -1.85
RRP42YDL111C ART10P18634 518 aaKnown RBP3.5□□□□□ -1.85
RRP42YDL111C MAK32P23060 363 aa3.5□□□□□ -1.85
RRP42YDL111C CLB1P24868 471 aa3.5□□□□□ -1.85
RRP42YDL111C IMG1P25626 169 aa3.5□□□□□ -1.85
RRP42YDL111C VPH1P32563 840 aaKnown RBP3.5□□□□□ -1.85
RRP42YDL111C ECM32P32644 1121 aaKnown RBP3.5□□□□□ -1.85
RRP42YDL111C PMT1P33775 817 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms