RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	OPY2	Q06810	360 aa		3.25	□□□□□ -1.89
PBP4	YDL053C	APL4	Q12028	832 aa		3.25	□□□□□ -1.89
PBP4	YDL053C	SPE2	P21182	396 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	PWP1	P21304	576 aa	Known RBP	3.24	□□□□□ -1.89
PBP4	YDL053C	PGS1	P25578	521 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	MCM10	P32354	571 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	RTS2	P40962	232 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	IAH1	P41734	238 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	STB2	P46679	850 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	STR3	P53101	465 aa	Known RBP	3.24	□□□□□ -1.89
PBP4	YDL053C	PKP2	P53170	491 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	BSC5	P53755	489 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	RAD30	Q04049	632 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	FMP42	Q04991	504 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	ATG26	Q06321	1198 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	SKM1	Q12469	655 aa		3.24	□□□□□ -1.89
PBP4	YDL053C	CDC24	P11433	854 aa	Predicted RBP	3.23	□□□□□ -1.89
PBP4	YDL053C	HNM1	P19807	563 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	GCS1	P35197	352 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	RKM3	P38222	552 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	ANS1	P38832	159 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	PHO90	P39535	881 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	SAD1	P43589	448 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	LYS4	P49367	693 aa	Predicted RBP	3.23	□□□□□ -1.89
PBP4	YDL053C	DIA3	P52290	468 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	YSA1	Q01976	231 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	SMA1	Q02651	245 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	RSF1	Q05043	376 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	GRS2	Q06817	618 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	YOR111W	Q99210	232 aa		3.23	□□□□□ -1.89
PBP4	YDL053C	PRE8	P23639	250 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	VMA16	P23968	213 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	GID7	P25569	745 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	TSC10	P38342	320 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	RTS1	P38903	757 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	ELO1	P39540	310 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	YAT2	P40017	923 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	FET5	P43561	622 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	RPS10B	P46784	105 aa	Known RBP	3.22	□□□□□ -1.89
PBP4	YDL053C	SGM1	P47166	707 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	NUP100	Q02629	959 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	EMI2	Q04409	500 aa	Known RBP	3.22	□□□□□ -1.89
PBP4	YDL053C	RTT109	Q07794	436 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	NDD1	Q08887	554 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	TCO89	Q08921	799 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	BSC1	Q12140	328 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	NKP1	Q12493	238 aa		3.22	□□□□□ -1.89
PBP4	YDL053C	RPL19A	P0CX82	189 aa	Known RBP	3.21	□□□□□ -1.9
PBP4	YDL053C	RPL19B	P0CX83	189 aa	Predicted RBP	3.21	□□□□□ -1.9
PBP4	YDL053C	BAR1	P12630	587 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	ADH7	P25377	361 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	RAD24	P32641	659 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	MUD2	P36084	527 aa	Known RBP	3.21	□□□□□ -1.9
PBP4	YDL053C	AGP2	P38090	596 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	MAL33	P38157	468 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	DBP8	P38719	431 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	UBA4	P38820	440 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	BZZ1	P38822	633 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	YEL068C	P39977	110 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	LYS14	P40971	790 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	ATG27	P46989	271 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	SOL4	P53315	255 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	YKU80	Q04437	629 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	YLR352W	Q06479	807 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	NRT1	Q08485	598 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	RPS10A	Q08745	105 aa	Predicted RBP	3.21	□□□□□ -1.9
PBP4	YDL053C	RDR1	Q08904	546 aa		3.21	□□□□□ -1.9
PBP4	YDL053C	LEU9	Q12166	604 aa	Known RBP	3.21	□□□□□ -1.9
PBP4	YDL053C	CDC16	P09798	840 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	SNF3	P10870	884 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	KAR3	P17119	729 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	ERG7	P38604	731 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	VID27	P40157	782 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	MAF1	P41910	395 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	YDR415C	Q04033	374 aa	Predicted RBP	3.2	□□□□□ -1.9
PBP4	YDL053C	GRC3	Q07845	632 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	TEN1	Q07921	160 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	TAH18	Q12181	623 aa		3.2	□□□□□ -1.9
PBP4	YDL053C	ARG81	P05085	880 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	PUT2	P07275	575 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	CDC23	P16522	626 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	PPZ1	P26570	692 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	CHS3	P29465	1165 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	MCM4	P30665	933 aa	Known RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	RPN2	P32565	945 aa	Known RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	RGI2	P40188	164 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	YIR014W	P40570	242 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	AZF1	P41696	914 aa		3.19	□□□□□ -1.9
PBP4	YDL053C	HOS2	P53096	452 aa	Predicted RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	ERG26	P53199	349 aa	Known RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	SVL3	Q03088	825 aa	Known RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	DPB4	Q04603	196 aa	Known RBP	3.19	□□□□□ -1.9
PBP4	YDL053C	ARD1	P07347	238 aa	Predicted RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	GLN3	P18494	730 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	KGD1	P20967	1014 aa	Known RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	YCK1	P23291	538 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	SEC1	P30619	724 aa	Known RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	SYN8	P31377	255 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	TRS65	P32893	560 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	PHD1	P36093	366 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms