RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W RRF1P38771 230 aa2.77□□□□□ -1.97
SPB1YCL054W YGR151CP53287 111 aa2.77□□□□□ -1.97
SPB1YCL054W BUD17P53727 317 aa2.77□□□□□ -1.97
SPB1YCL054W RPA49Q01080 415 aaPredicted RBP2.77□□□□□ -1.97
SPB1YCL054W MRD1Q06106 887 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W USV1Q12132 391 aa2.77□□□□□ -1.97
SPB1YCL054W YJR112W-AQ3E743 109 aa2.77□□□□□ -1.97
SPB1YCL054W PWP1P21304 576 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W STE50P25344 346 aa2.77□□□□□ -1.97
SPB1YCL054W DBF4P32325 704 aa2.77□□□□□ -1.97
SPB1YCL054W NTH1P32356 751 aa2.77□□□□□ -1.97
SPB1YCL054W SMY1P32364 656 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W STB6P36085 766 aa2.77□□□□□ -1.97
SPB1YCL054W ERC1P38767 581 aa2.77□□□□□ -1.97
SPB1YCL054W YIL161WP40449 235 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W YIP4P53093 235 aa2.77□□□□□ -1.97
SPB1YCL054W NMA2P53204 395 aa2.77□□□□□ -1.97
SPB1YCL054W YNL050CP53952 270 aa2.77□□□□□ -1.97
SPB1YCL054W VTI1Q04338 217 aa2.77□□□□□ -1.97
SPB1YCL054W YDL086WQ07505 273 aa2.77□□□□□ -1.97
SPB1YCL054W RTT109Q07794 436 aa2.77□□□□□ -1.97
SPB1YCL054W BMS1Q08965 1183 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W HSP42Q12329 375 aa2.77□□□□□ -1.97
SPB1YCL054W ERG27Q12452 347 aaKnown RBP2.77□□□□□ -1.97
SPB1YCL054W ARD1P07347 238 aaPredicted RBP2.76□□□□□ -1.97
SPB1YCL054W STE12P13574 688 aa2.76□□□□□ -1.97
SPB1YCL054W KGD1P20967 1014 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W GCD7P32502 381 aaPredicted RBP2.76□□□□□ -1.97
SPB1YCL054W HES1P35843 434 aa2.76□□□□□ -1.97
SPB1YCL054W KTR3P38130 404 aaPredicted RBP2.76□□□□□ -1.97
SPB1YCL054W SKP2P42843 763 aa2.76□□□□□ -1.97
SPB1YCL054W CTK2P46962 323 aa2.76□□□□□ -1.97
SPB1YCL054W MNN10P50108 393 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W KIN4Q01919 800 aa2.76□□□□□ -1.97
SPB1YCL054W YDL144CQ07589 356 aa2.76□□□□□ -1.97
SPB1YCL054W YOL159CQ08300 171 aa2.76□□□□□ -1.97
SPB1YCL054W RKI1Q12189 258 aa2.76□□□□□ -1.97
SPB1YCL054W COX1P00401 534 aa2.76□□□□□ -1.97
SPB1YCL054W PMA1P05030 918 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W YPK1P12688 680 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W STE11P23561 717 aa2.76□□□□□ -1.97
SPB1YCL054W SYN8P31377 255 aa2.76□□□□□ -1.97
SPB1YCL054W PDB1P32473 366 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W WBP1P33767 430 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W TIF3P34167 436 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W CCL1P37366 393 aa2.76□□□□□ -1.97
SPB1YCL054W KSP1P38691 1029 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W REV7P38927 245 aa2.76□□□□□ -1.97
SPB1YCL054W TCB2P48231 1178 aa2.76□□□□□ -1.97
SPB1YCL054W PHO23P50947 330 aa2.76□□□□□ -1.97
SPB1YCL054W NNF2P53253 936 aa2.76□□□□□ -1.97
SPB1YCL054W TIM11P81449 96 aaPredicted RBP2.76□□□□□ -1.97
SPB1YCL054W UBP16Q02863 499 aa2.76□□□□□ -1.97
SPB1YCL054W YML037CQ03703 340 aa2.76□□□□□ -1.97
SPB1YCL054W YSH1Q06224 779 aaPredicted RBP2.76□□□□□ -1.97
SPB1YCL054W LCB4Q12246 624 aa2.76□□□□□ -1.97
SPB1YCL054W PAR32Q12515 295 aaKnown RBP2.76□□□□□ -1.97
SPB1YCL054W YER175W-AQ8TGU4 54 aa2.76□□□□□ -1.97
SPB1YCL054W AI5_ALPHAQ9ZZX1 630 aa2.76□□□□□ -1.97
SPB1YCL054W UTP10P42945 1769 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W DFR1P07807 211 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SPB1YCL054W MET3P08536 511 aa2.75□□□□□ -1.97
SPB1YCL054W PDE1P22434 369 aa2.75□□□□□ -1.97
SPB1YCL054W CLB1P24868 471 aa2.75□□□□□ -1.97
SPB1YCL054W ERG4P25340 473 aa2.75□□□□□ -1.97
SPB1YCL054W VID24P38263 362 aa2.75□□□□□ -1.97
SPB1YCL054W YHR218WP38899 603 aa2.75□□□□□ -1.97
SPB1YCL054W MAM1P40065 302 aa2.75□□□□□ -1.97
SPB1YCL054W DJP1P40564 432 aa2.75□□□□□ -1.97
SPB1YCL054W MSE1P48525 536 aa2.75□□□□□ -1.97
SPB1YCL054W MCM6P53091 1017 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W HOT1Q03213 719 aa2.75□□□□□ -1.97
SPB1YCL054W AIM32Q04689 311 aa2.75□□□□□ -1.97
SPB1YCL054W RBS1Q05672 457 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W CRN1Q06440 651 aa2.75□□□□□ -1.97
SPB1YCL054W YLR040CQ07988 224 aa2.75□□□□□ -1.97
SPB1YCL054W ATG9Q12142 997 aa2.75□□□□□ -1.97
SPB1YCL054W MNE1P24720 663 aa2.75□□□□□ -1.97
SPB1YCL054W HCM1P25364 564 aa2.75□□□□□ -1.97
SPB1YCL054W HIS7P33734 552 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W NTR2P36118 322 aaPredicted RBP2.75□□□□□ -1.97
SPB1YCL054W PFF1P38244 976 aa2.75□□□□□ -1.97
SPB1YCL054W YNG2P38806 282 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W YAT1P80235 687 aa2.75□□□□□ -1.97
SPB1YCL054W OAZ1Q02803 292 aa2.75□□□□□ -1.97
SPB1YCL054W UFO1Q04511 668 aa2.75□□□□□ -1.97
SPB1YCL054W CUE5Q08412 411 aaKnown RBP2.75□□□□□ -1.97
SPB1YCL054W ISA2Q12425 185 aa2.75□□□□□ -1.97
SPB1YCL054W PMD1P32634 1753 aa2.74□□□□□ -1.97
SPB1YCL054W YBR085C-AO43137 85 aa2.74□□□□□ -1.97
SPB1YCL054W AAC1P04710 309 aa2.74□□□□□ -1.97
SPB1YCL054W CHO2P05374 869 aaKnown RBP2.74□□□□□ -1.97
SPB1YCL054W PRE8P23639 250 aa2.74□□□□□ -1.97
SPB1YCL054W BUD14P27637 709 aa2.74□□□□□ -1.97
SPB1YCL054W ICL1P28240 557 aaPredicted RBP2.74□□□□□ -1.97
SPB1YCL054W SWC3P31376 625 aa2.74□□□□□ -1.97
SPB1YCL054W GDA1P32621 518 aa2.74□□□□□ -1.97
SPB1YCL054W SEC66P33754 206 aa2.74□□□□□ -1.97
SPB1YCL054W UBP11P36026 717 aa2.74□□□□□ -1.97
SPB1YCL054W THI2P38141 450 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms