RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C DCC1P25559 380 aa6.84□□□□□ -1.31
TDP1YBR223C VPH1P32563 840 aaKnown RBP6.84□□□□□ -1.31
TDP1YBR223C CTF13P35203 478 aa6.84□□□□□ -1.31
TDP1YBR223C LHS1P36016 881 aa6.84□□□□□ -1.31
TDP1YBR223C EFM1P38732 585 aa6.84□□□□□ -1.31
TDP1YBR223C ACO2P39533 789 aa6.84□□□□□ -1.31
TDP1YBR223C MET18P40469 1032 aa6.84□□□□□ -1.31
TDP1YBR223C COS4P43542 379 aa6.84□□□□□ -1.31
TDP1YBR223C MTR3P48240 250 aaPredicted RBP6.84□□□□□ -1.31
TDP1YBR223C PRP24P49960 444 aaKnown RBP6.84□□□□□ -1.31
TDP1YBR223C SHE4P51534 789 aa6.84□□□□□ -1.31
TDP1YBR223C DIA3P52290 468 aa6.84□□□□□ -1.31
TDP1YBR223C CLD1P53264 445 aa6.84□□□□□ -1.31
TDP1YBR223C PRP38Q00723 242 aaPredicted RBP6.84□□□□□ -1.31
TDP1YBR223C GOT1Q03554 138 aa6.84□□□□□ -1.31
TDP1YBR223C RAD30Q04049 632 aa6.84□□□□□ -1.31
TDP1YBR223C HEL2Q05580 639 aaKnown RBP6.84□□□□□ -1.31
TDP1YBR223C UAF30Q08747 228 aa6.84□□□□□ -1.31
TDP1YBR223C MRH1Q12117 320 aaPredicted RBP6.84□□□□□ -1.31
TDP1YBR223C YVC1Q12324 675 aa6.84□□□□□ -1.31
TDP1YBR223C RMD5Q12508 421 aa6.84□□□□□ -1.31
TDP1YBR223C FBA1P14540 359 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C ADK2P26364 225 aa6.83□□□□□ -1.32
TDP1YBR223C RPS5P26783 225 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C BRF1P29056 596 aa6.83□□□□□ -1.32
TDP1YBR223C MF(ALPHA)2P32435 120 aa6.83□□□□□ -1.32
TDP1YBR223C SSE2P32590 693 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C COX13P32799 129 aa6.83□□□□□ -1.32
TDP1YBR223C NPL6P32832 435 aa6.83□□□□□ -1.32
TDP1YBR223C TSA1P34760 196 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C SRP72P38688 640 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C DSS1P39112 969 aa6.83□□□□□ -1.32
TDP1YBR223C GIP4P39732 760 aa6.83□□□□□ -1.32
TDP1YBR223C VHR1P40522 640 aa6.83□□□□□ -1.32
TDP1YBR223C YIR007WP40566 764 aa6.83□□□□□ -1.32
TDP1YBR223C BUD13P46947 266 aaPredicted RBP6.83□□□□□ -1.32
TDP1YBR223C RMR1P53060 241 aa6.83□□□□□ -1.32
TDP1YBR223C YNR063WP53749 607 aa6.83□□□□□ -1.32
TDP1YBR223C DSL1P53847 754 aa6.83□□□□□ -1.32
TDP1YBR223C YNL095CP53932 642 aa6.83□□□□□ -1.32
TDP1YBR223C ASI1P54074 624 aa6.83□□□□□ -1.32
TDP1YBR223C PIR3Q03180 325 aa6.83□□□□□ -1.32
TDP1YBR223C MMT1Q03218 510 aa6.83□□□□□ -1.32
TDP1YBR223C GSF2Q04697 403 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C LOT6Q07923 191 aa6.83□□□□□ -1.32
TDP1YBR223C IES3Q12345 250 aa6.83□□□□□ -1.32
TDP1YBR223C SUC2P00724 532 aa6.83□□□□□ -1.32
TDP1YBR223C ATP1P07251 545 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C HSF1P10961 833 aa6.83□□□□□ -1.32
TDP1YBR223C MSS116P15424 664 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C PHO81P17442 1178 aa6.83□□□□□ -1.32
TDP1YBR223C UGA1P17649 471 aa6.83□□□□□ -1.32
TDP1YBR223C URE2P23202 354 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C RBK1P25332 333 aa6.83□□□□□ -1.32
TDP1YBR223C POT1P27796 417 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
TDP1YBR223C CIN8P27895 1000 aa6.83□□□□□ -1.32
TDP1YBR223C MET22P32179 357 aa6.83□□□□□ -1.32
TDP1YBR223C PUP2P32379 260 aa6.83□□□□□ -1.32
TDP1YBR223C KAR9P32526 644 aa6.83□□□□□ -1.32
TDP1YBR223C WHI3P34761 661 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C ROT2P38138 954 aa6.83□□□□□ -1.32
TDP1YBR223C YBR138CP38277 524 aa6.83□□□□□ -1.32
TDP1YBR223C ARP1P38696 384 aa6.83□□□□□ -1.32
TDP1YBR223C STB5P38699 743 aa6.83□□□□□ -1.32
TDP1YBR223C APE4P38821 490 aa6.83□□□□□ -1.32
TDP1YBR223C ALG8P40351 577 aa6.83□□□□□ -1.32
TDP1YBR223C ELP2P42935 788 aa6.83□□□□□ -1.32
TDP1YBR223C AGP3P43548 558 aa6.83□□□□□ -1.32
TDP1YBR223C SPO74P45819 413 aa6.83□□□□□ -1.32
TDP1YBR223C FMP30Q02883 468 aa6.83□□□□□ -1.32
TDP1YBR223C SVL3Q03088 825 aaKnown RBP6.83□□□□□ -1.32
TDP1YBR223C YML083CQ04526 418 aa6.83□□□□□ -1.32
TDP1YBR223C RCO1Q04779 684 aa6.83□□□□□ -1.32
TDP1YBR223C YLR413WQ06689 675 aa6.83□□□□□ -1.32
TDP1YBR223C MSH5Q12175 901 aa6.83□□□□□ -1.32
TDP1YBR223C ICT1Q12385 394 aa6.83□□□□□ -1.32
TDP1YBR223C YDR524C-BQ3E6R4 66 aa6.83□□□□□ -1.32
TDP1YBR223C ARG3P05150 338 aa6.82□□□□□ -1.32
TDP1YBR223C PHO3P24031 467 aa6.82□□□□□ -1.32
TDP1YBR223C PTP2P29461 750 aa6.82□□□□□ -1.32
TDP1YBR223C GUT2P32191 649 aa6.82□□□□□ -1.32
TDP1YBR223C PEP7P32609 515 aa6.82□□□□□ -1.32
TDP1YBR223C FRE2P36033 711 aa6.82□□□□□ -1.32
TDP1YBR223C SKG1P36169 355 aa6.82□□□□□ -1.32
TDP1YBR223C KTR4P38131 464 aa6.82□□□□□ -1.32
TDP1YBR223C YBR241CP38142 488 aa6.82□□□□□ -1.32
TDP1YBR223C SLX1P38324 304 aa6.82□□□□□ -1.32
TDP1YBR223C YHL012WP38709 493 aa6.82□□□□□ -1.32
TDP1YBR223C FAD1P38913 306 aa6.82□□□□□ -1.32
TDP1YBR223C DHH1P39517 506 aaKnown RBP6.82□□□□□ -1.32
TDP1YBR223C KTR7P40504 517 aa6.82□□□□□ -1.32
TDP1YBR223C UFE1P41834 346 aa6.82□□□□□ -1.32
TDP1YBR223C UPF3P48412 387 aaKnown RBP6.82□□□□□ -1.32
TDP1YBR223C KEL2P50090 882 aa6.82□□□□□ -1.32
TDP1YBR223C MET13P53128 600 aa6.82□□□□□ -1.32
TDP1YBR223C SFB2P53953 876 aa6.82□□□□□ -1.32
TDP1YBR223C SPP1Q03012 353 aa6.82□□□□□ -1.32
TDP1YBR223C HER2Q03557 464 aa6.82□□□□□ -1.32
TDP1YBR223C PEX12Q04370 399 aa6.82□□□□□ -1.32
TDP1YBR223C YLR012CQ07927 99 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms