RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 EHD4Q9H223 541 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 FOXN1O15353 648 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 MYL5Q02045 173 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 POSTNQ15063 836 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 MYRIPQ8NFW9 859 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
TRIM3-215ENST00000639856 USP17L5A8MUK1 530 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
TRIM3-215ENST00000639856 DYNC1I1O14576 645 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
TRIM3-215ENST00000639856 GSDMDP57764 484 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 ARID5BQ14865 1188 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 NT5DC1Q5TFE4 455 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 DHX36Q9H2U1 1008 aaKnown RBP17.2■□□□□ 0.34
TRIM3-215ENST00000639856 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 MYO3BQ8WXR4 1341 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 SMC2O95347 1197 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
TRIM3-215ENST00000639856 GNAQP50148 359 aa17.2■□□□□ 0.34
TRIM3-215ENST00000639856 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 ACTN4O43707 911 aaKnown RBP17.19■□□□□ 0.34
TRIM3-215ENST00000639856 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 BMP6P22004 513 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
TRIM3-215ENST00000639856 NLRP5P59047 1200 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 TAOK3Q9H2K8 898 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
TRIM3-215ENST00000639856 UTRNP46939 3433 aa17.19■□□□□ 0.34
TRIM3-215ENST00000639856 WNT7AO00755 349 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 FANCCQ00597 558 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 PDILTQ8N807 584 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 NFKBIEO00221 500 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
TRIM3-215ENST00000639856 PDHBP11177 359 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 SKILP12757 684 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 CCZ1BP86790 482 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 CCZ1P86791 482 aaPredicted RBP17.18■□□□□ 0.34
TRIM3-215ENST00000639856 CXCL9Q07325 125 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 MAN1B1Q9UKM7 699 aa17.18■□□□□ 0.34
TRIM3-215ENST00000639856 TCP10L2B9ZVM9 353 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 MYO1BO43795 1136 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 TTLL1O95922 423 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 UPF1Q92900 1129 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM3-215ENST00000639856 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 PTGER2P43116 358 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 ZNF174Q15697 407 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 HEATR3Q7Z4Q2 680 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 SPATA20Q8TB22 786 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 SPZ1Q9BXG8 430 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
TRIM3-215ENST00000639856 ATRNL1Q5VV63 1379 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 ENTPD3O75355 529 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 CALML3P27482 149 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRIM3-215ENST00000639856 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
TRIM3-215ENST00000639856 MORC3Q14149 939 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 DLGAP5Q15398 846 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 MLKLQ8NB16 471 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 ZNF70Q9UC06 446 aaPredicted RBP17.16■□□□□ 0.34
TRIM3-215ENST00000639856 HDAC9Q9UKV0 1011 aa17.16■□□□□ 0.34
TRIM3-215ENST00000639856 GDF11O95390 407 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 PTGDRQ13258 359 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CERKLQ49MI3 558 aaPredicted RBP17.15■□□□□ 0.34
TRIM3-215ENST00000639856 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 TMC6Q7Z403 805 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 TRIM34Q9BYJ4 488 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 DACH1Q9UI36 760 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 A0A087X0B3 334 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms