RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	SLC35G2	Q8TBE7	412 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMEM40	Q8WWA1	233 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	LTV1	Q96GA3	475 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	CCDC34	Q96HJ3	373 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	WNK4	Q96J92	1243 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SGCZ	Q96LD1	299 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	MAGEB10	Q96LZ2	347 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	FAM193B	Q96PV7	902 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SEC62	Q99442	399 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	EIF2AK1	Q9BQI3	630 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	NAA15	Q9BXJ9	866 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SLC26A6	Q9BXS9	759 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	MTFR1L	Q9H019	292 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ATP6V0A4	Q9HBG4	840 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PRDM9	Q9NQV7	894 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ANLN	Q9NQW6	1124 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ARHGEF4	Q9NR80	690 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMPRSS4	Q9NRS4	437 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	NKIRAS2	Q9NYR9	191 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	LRP2BP	Q9P2M1	347 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	DDX20	Q9UHI6	824 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	FBXO10	Q9UK96	956 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	GJD2	Q9UKL4	321 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	CEP131	Q9UPN4	1083 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	BCS1L	Q9Y276	419 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMEM98	Q9Y2Y6	226 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PCDHGB3	Q9Y5G1	929 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TNPO3	Q9Y5L0	923 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	USP3	Q9Y6I4	520 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293		A0A1W2PQU0	124 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SMTNL1	A8MU46	457 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ARHGAP33	O14559	1287 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NCAM2	O15394	837 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	PPFIA3	O75145	1194 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	XYLB	O75191	536 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	PRKD3	O94806	890 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	DDX58	O95786	925 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ADH1B	P00325	375 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	IL2RA	P01589	272 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	HOXB3	P14651	431 aa	Predicted RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NAT1	P18440	290 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ITPKA	P23677	461 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ELF1	P32519	619 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	RAD52	P43351	418 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	MMP14	P50281	582 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	IL2	P60568	153 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ROR1	Q01973	937 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	RPL6	Q02878	288 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NEXN	Q0ZGT2	675 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CLN3	Q13286	438 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SEPT7	Q16181	437 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CCNG2	Q16589	344 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	GNPTAB	Q3T906	1256 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ATP13A4	Q4VNC1	1196 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CCDC158	Q5M9N0	1113 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	RC3H1	Q5TC82	1133 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	AGAP9	Q5VTM2	703 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ITPRIPL1	Q6GPH6	555 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	PGM2L1	Q6PCE3	622 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NSMF	Q6X4W1	530 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	UNC5A	Q6ZN44	842 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	FASTKD5	Q7L8L6	764 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	DPP9	Q86TI2	863 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SNX32	Q86XE0	403 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CCNJL	Q8IV13	435 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SLC41A1	Q8IVJ1	513 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	BRSK2	Q8IWQ3	736 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CMTR2	Q8IYT2	770 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	OTUD6B	Q8N6M0	293 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ARL6IP6	Q8N6S5	226 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	C7orf31	Q8N865	590 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	RHBDD1	Q8TEB9	315 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	USP13	Q92995	863 aa	Predicted RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	VMP1	Q96GC9	406 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	AHCYL2	Q96HN2	611 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	FAXDC2	Q96IV6	333 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SUSD3	Q96L08	255 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NLRP3	Q96P20	1036 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ORAI3	Q9BRQ5	295 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	CRB3	Q9BUF7	120 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	WDR12	Q9GZL7	423 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	PDGFD	Q9GZP0	370 aa	Predicted RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	EFCC1	Q9HA90	598 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	TRIM39	Q9HCM9	518 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SEC31B	Q9NQW1	1179 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	BLOC1S4	Q9NUP1	217 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMEM39A	Q9NV64	488 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	MKS1	Q9NXB0	559 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	PGPEP1	Q9NXJ5	209 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	RRN3	Q9NYV6	651 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	NDOR1	Q9UHB4	597 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	GPN3	Q9UHW5	284 aa	Predicted RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMCC3	Q9ULS5	477 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	KCNMB2	Q9Y691	235 aa		3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	SETD1B	Q9UPS6	1966 aa	Known RBP	3.05	□□□□□ -1.92
GABRB3-223	ENST00000637293	ERBB4	Q15303	1308 aa		3.04	□□□□□ -1.92
GABRB3-223	ENST00000637293	ANKRD34B	A5PLL1	514 aa		3.04	□□□□□ -1.92
GABRB3-223	ENST00000637293	KLHL33	A6NCF5	533 aa		3.04	□□□□□ -1.92
GABRB3-223	ENST00000637293	FAM83G	A6ND36	823 aa		3.04	□□□□□ -1.92

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