RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	ZNF408	Q9H9D4	720 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NLRC4	Q9NPP4	1024 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	UHRF1BP1L	A0JNW5	1464 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MAST3	O60307	1309 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NR1D1	P20393	614 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NAPA	P54920	295 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CORO7	P57737	925 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	BIRC2	Q13490	618 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ARHGEF6	Q15052	776 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DAAM2	Q86T65	1068 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC84	Q86UT8	332 aa	Predicted RBP	10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IP6K1	Q92551	441 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CEP63	Q96MT8	703 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NAP1L4	Q99733	375 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SLC24A3	Q9HC58	644 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	EPB41L5	Q9HCM4	733 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ATP7B	P35670	1465 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HEXIM1	O94992	359 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SLC20A2	Q08357	652 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HS2ST1	Q7LGA3	356 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC77	Q9BR77	488 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ZNF446	Q9NWS9	450 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SHROOM2	Q13796	1616 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SLC8A3	P57103	927 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CNNM4	Q6P4Q7	775 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	APOA5	Q6Q788	366 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC63	Q8NA47	563 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ASXL2	Q76L83	1435 aa		10.07	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CDC42BPB	Q9Y5S2	1711 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ACTN3	Q08043	901 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC14	Q49A88	953 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ALS2CL	Q60I27	953 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TRIM68	Q6AZZ1	485 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RBM43	Q6ZSC3	357 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	COG1	Q8WTW3	980 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ARHGEF40	Q8TER5	1519 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TMEM110-MUSTN1	A8MSY1	372 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TEX33	O43247	280 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LDHB	P07195	334 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GBP1	P32455	592 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RESP18	Q5W5W9	173 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PLBD2	Q8NHP8	589 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RRP36	Q96EU6	259 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KRT12	Q99456	494 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MRPL44	Q9H9J2	332 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CYP27A1	Q02318	531 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CALCOCO2	Q13137	446 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	VSIG1	Q86XK7	387 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CNBD1	Q8NA66	436 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ARHGAP31	Q2M1Z3	1444 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	VIRMA	Q69YN4	1812 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SH3TC1	Q8TE82	1336 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ZNF532	Q9HCE3	1301 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KCNK3	O14649	394 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ACTN4	O43707	911 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GTPBP6	O43824	516 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KIF22	Q14807	665 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SV2B	Q7L1I2	683 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RIN2	Q8WYP3	895 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DDX23	Q9BUQ8	820 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NKIRAS1	Q9NYS0	192 aa		10.06	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MAGEB6P1	A0A0J9YX57	407 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KIF1C	O43896	1103 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RPN1	P04843	607 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PARP1	P09874	1014 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	USP14	P54578	494 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ZBTB16	Q05516	673 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PTPRO	Q16827	1216 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TSNAXIP1	Q2TAA8	658 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LETM2	Q2VYF4	491 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KRT79	Q5XKE5	535 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SPC25	Q9HBM1	224 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HDAC6	Q9UBN7	1215 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SUFU	Q9UMX1	484 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DKC1	O60832	514 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PRDM1	O75626	825 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KLHL30	Q0D2K2	578 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KRT31	Q15323	416 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	REXO1L1P	Q8IX06	675 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PPFIBP2	Q8ND30	876 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048		H3BQF6	201 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048		M0R2C6	588 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GNPAT	O15228	680 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SNX16	P57768	344 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ASIC2	Q16515	512 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GPR162	Q16538	588 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	EMB	Q6PCB8	327 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ZNF654	Q8IZM8	581 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IQCG	Q9H095	443 aa	Known RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	YY1AP1	Q9H869	796 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ABHD10	Q9NUJ1	306 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC87	Q9NVE4	849 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SLC5A4	Q9NY91	659 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ABCA6	Q8N139	1617 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ATP2A1	O14983	1001 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms