RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 SOGA3Q5TF21 947 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 TTC6Q86TZ1 520 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 ACTR10Q9NZ32 417 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 DAGLAQ9Y4D2 1042 aa10.03□□□□□ -0.8
SMARCA2-239ENST00000635388 RIMS2Q9UQ26 1411 aa10.02□□□□□ -0.81
SMARCA2-239ENST00000635388 YARSP54577 528 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-239ENST00000635388 RASSF7Q02833 373 aa10.02□□□□□ -0.81
SMARCA2-239ENST00000635388 NWD1Q149M9 1564 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 CHD2O14647 1828 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 UNC5AQ6ZN44 842 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 YIPF2Q9BWQ6 316 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 OSBPL2Q9H1P3 480 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 C1GALT1Q9NS00 363 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 LTBP3Q9NS15 1303 aa10.01□□□□□ -0.81
SMARCA2-239ENST00000635388 RGS13O14921 159 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 UBOX5O94941 541 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 RAG1P15918 1043 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 MICAL1Q8TDZ2 1067 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 SSU72Q9NP77 194 aaKnown RBP10□□□□□ -0.81
SMARCA2-239ENST00000635388 LRRC7Q96NW7 1537 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 DIP2AQ14689 1571 aa10□□□□□ -0.81
SMARCA2-239ENST00000635388 MAP7Q14244 749 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 MFSD2AQ8NA29 543 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 KIF2CQ99661 725 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 PIF1Q9H611 641 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 PLEKHG1Q9ULL1 1385 aa9.99□□□□□ -0.81
SMARCA2-239ENST00000635388 ALKQ9UM73 1620 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 FAM95CA0A1B0GW59 222 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 CCNFP41002 786 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 PHACTR4Q8IZ21 702 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 DNAJB8Q8NHS0 232 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 XAGE3Q8WTP9 111 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 GATA6Q92908 595 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 LGR6Q9HBX8 967 aa9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 NKTRP30414 1462 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-239ENST00000635388 NRXN3Q9Y4C0 1643 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 DHX15O43143 795 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 SLITRK5O94991 958 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 GATA4P43694 442 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 CDK5R2Q13319 367 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 DDR2Q16832 855 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 BEND4Q6ZU67 534 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 TRIM55Q9BYV6 548 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 SIRPGQ9P1W8 387 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 NEXMIFQ5QGS0 1516 aa9.97□□□□□ -0.81
SMARCA2-239ENST00000635388 PPLO60437 1756 aa9.96□□□□□ -0.81
SMARCA2-239ENST00000635388 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 RXRBP28702 533 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 RASA3Q14644 834 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 MKL1Q969V6 931 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 SLC26A8Q96RN1 970 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 FAM83CQ9BQN1 747 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 KCNF1Q9H3M0 494 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 SLC12A7Q9Y666 1083 aa9.96□□□□□ -0.82
SMARCA2-239ENST00000635388 B2RBV5 119 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 LARP1BQ659C4 914 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 CLEC10AQ8IUN9 316 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 RIN3Q8TB24 985 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 KLHL6Q8WZ60 621 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 TP53INP1Q96A56 240 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 MIPEPQ99797 713 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 PRDM10Q9NQV6 1147 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 TPSG1Q9NRR2 321 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 MAPK8IP1Q9UQF2 711 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 SETBP1Q9Y6X0 1596 aa9.95□□□□□ -0.82
SMARCA2-239ENST00000635388 TOM1O60784 492 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 NFKBIBQ15653 356 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 MRM1Q6IN84 353 aaKnown RBP9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 LETMD1Q6P1Q0 360 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 PAOXQ6QHF9 649 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 SLC6A18Q96N87 628 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 C7orf69Q9H7B7 122 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 ZSWIM4Q9H7M6 989 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 RAXQ9Y2V3 346 aa9.94□□□□□ -0.82
SMARCA2-239ENST00000635388 XRN1Q8IZH2 1706 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 ADAMTS13Q76LX8 1427 aa9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 HMX2A2RU54 273 aa9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 RBAK-RBAKDNI3L0D1 243 aa9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 K7ELQ4 463 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-239ENST00000635388 GJB6O95452 261 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms