RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ADORA2AP29274 412 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 GJA8P48165 433 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 NOVP48745 357 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 TRDNQ13061 729 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 MFSD14CQ5VZR4 134 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 CPXCR1Q8N123 301 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 TMEM47Q9BQJ4 181 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 ZKSCAN3Q9BRR0 538 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 TEX13BQ9BXU2 312 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 RPTORQ8N122 1335 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 PLXNB2O15031 1838 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 TFRCP02786 760 aaKnown RBP18.46■□□□□ 0.55
LINC00339-207ENST00000634712 PTH1RQ03431 593 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 TRIM32Q13049 653 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 CCL14Q16627 93 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 BMP2KLQ5H9B9 411 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 SNRNP48Q6IEG0 339 aaKnown RBP18.46■□□□□ 0.55
LINC00339-207ENST00000634712 SKAP1Q86WV1 359 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 ABRAQ8N0Z2 381 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 REPS2Q8NFH8 660 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
LINC00339-207ENST00000634712 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 MMP19Q99542 508 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC00339-207ENST00000634712 ZNF214Q9UL59 606 aaPredicted RBP18.46■□□□□ 0.55
LINC00339-207ENST00000634712 PARP14Q460N5 1801 aa18.46■□□□□ 0.55
LINC00339-207ENST00000634712 PLA2G6O60733 806 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 SGPL1O95470 568 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 HOXC6P09630 235 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 PRKAR2AP13861 404 aaKnown RBP18.45■□□□□ 0.54
LINC00339-207ENST00000634712 CAPN2P17655 700 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 KCTD2Q14681 263 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 DGKHQ86XP1 1220 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 SLC38A10Q9HBR0 1119 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 RAVER2Q9HCJ3 691 aaKnown RBP18.45■□□□□ 0.54
LINC00339-207ENST00000634712 A0A0G2JMZ2 1700 aa18.45■□□□□ 0.54
LINC00339-207ENST00000634712 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
LINC00339-207ENST00000634712 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
LINC00339-207ENST00000634712 NPLOC4Q8TAT6 608 aa18.44■□□□□ 0.54
LINC00339-207ENST00000634712 ZSCAN10Q96SZ4 725 aaPredicted RBP18.44■□□□□ 0.54
LINC00339-207ENST00000634712 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
LINC00339-207ENST00000634712 PAK6Q9NQU5 681 aaPredicted RBP18.44■□□□□ 0.54
LINC00339-207ENST00000634712 ZSWIM5Q9P217 1185 aa18.44■□□□□ 0.54
LINC00339-207ENST00000634712 ATP2A1O14983 1001 aa18.43■□□□□ 0.54
LINC00339-207ENST00000634712 OAZ1P54368 228 aa18.43■□□□□ 0.54
LINC00339-207ENST00000634712 CACNB2Q08289 660 aaPredicted RBP18.43■□□□□ 0.54
LINC00339-207ENST00000634712 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
LINC00339-207ENST00000634712 LAMA4Q16363 1823 aa18.43■□□□□ 0.54
LINC00339-207ENST00000634712 COBLO75128 1261 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 CYP21A2P08686 494 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 ESYT1Q9BSJ8 1104 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 FLRT1Q9NZU1 646 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 FBXO40Q9UH90 709 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 BRCA2P51587 3418 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 FRMPD2Q68DX3 1309 aaPredicted RBP18.42■□□□□ 0.54
LINC00339-207ENST00000634712 MAP3K21Q5TCX8 1036 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 OLFML2BQ68BL8 750 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 RALYLQ86SE5 291 aaKnown RBP18.42■□□□□ 0.54
LINC00339-207ENST00000634712 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 PRR12Q9ULL5 1215 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 RIPK3Q9Y572 518 aa18.42■□□□□ 0.54
LINC00339-207ENST00000634712 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
LINC00339-207ENST00000634712 TNKSO95271 1327 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 PDHBP11177 359 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 CNGA1P29973 690 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 CYP2C19P33261 490 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 SLC16A2P36021 539 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 NCOA7Q8NI08 942 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 ANO2Q9NQ90 1003 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
LINC00339-207ENST00000634712 ERICH2A1L162 156 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 PGK2P07205 417 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
LINC00339-207ENST00000634712 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 TTBK2Q6IQ55 1244 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
LINC00339-207ENST00000634712 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
LINC00339-207ENST00000634712 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 E7EWF7 191 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 CDC45O75419 566 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 FARP2O94887 1054 aaPredicted RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 ALAS1P13196 640 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 CCND3P30281 292 aaPredicted RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 SNAP25P60880 206 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 ZNF543Q08ER8 600 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms