RNA–Protein interactions for RNA: ENST00000625379.1

UBE2A-205, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 3

Gene UBE2A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-205ENST00000625379 NEDD1Q8NHV4 660 aa28.56■■■□□ 2.16
UBE2A-205ENST00000625379 CHMP4CQ96CF2 233 aa28.56■■■□□ 2.16
UBE2A-205ENST00000625379 TINF2Q9BSI4 451 aa28.56■■■□□ 2.16
UBE2A-205ENST00000625379 UBE2OQ9C0C9 1292 aaKnown RBP28.56■■■□□ 2.16
UBE2A-205ENST00000625379 SLC3A2P08195 630 aaKnown RBP28.55■■■□□ 2.16
UBE2A-205ENST00000625379 RTP1P59025 263 aa28.55■■■□□ 2.16
UBE2A-205ENST00000625379 CTDSPL2Q05D32 466 aa28.55■■■□□ 2.16
UBE2A-205ENST00000625379 HDAC1Q13547 482 aaPredicted RBP28.55■■■□□ 2.16
UBE2A-205ENST00000625379 VPS53Q5VIR6 699 aa28.55■■■□□ 2.16
UBE2A-205ENST00000625379 INCENPQ9NQS7 918 aa28.55■■■□□ 2.16
UBE2A-205ENST00000625379 PDE1AP54750 535 aa28.54■■■□□ 2.16
UBE2A-205ENST00000625379 GMCL1P1Q8NEA9 526 aa28.54■■■□□ 2.16
UBE2A-205ENST00000625379 RAVER2Q9HCJ3 691 aaKnown RBP28.54■■■□□ 2.16
UBE2A-205ENST00000625379 ISY1Q9ULR0 285 aaKnown RBP28.54■■■□□ 2.16
UBE2A-205ENST00000625379 ATP11BQ9Y2G3 1177 aa28.54■■■□□ 2.16
UBE2A-205ENST00000625379 ZBED4O75132 1171 aa28.53■■■□□ 2.16
UBE2A-205ENST00000625379 LRRC41Q15345 812 aa28.53■■■□□ 2.16
UBE2A-205ENST00000625379 SLFN13Q68D06 897 aa28.53■■■□□ 2.16
UBE2A-205ENST00000625379 TDHQ8IZJ6 230 aa28.53■■■□□ 2.16
UBE2A-205ENST00000625379 LENG1Q96BZ8 264 aaPredicted RBP28.53■■■□□ 2.16
UBE2A-205ENST00000625379 FEM1BQ9UK73 627 aa28.53■■■□□ 2.16
UBE2A-205ENST00000625379 DIS3Q9Y2L1 958 aaKnown RBP28.53■■■□□ 2.16
UBE2A-205ENST00000625379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.53■■■□□ 2.16
UBE2A-205ENST00000625379 CTDP1Q9Y5B0 961 aaPredicted RBP28.53■■■□□ 2.16
UBE2A-205ENST00000625379 ADCYAP1R1P41586 468 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 FERMT2Q96AC1 680 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 EVI5LQ96CN4 794 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 SLC38A10Q9HBR0 1119 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 XPNPEP3Q9NQH7 507 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 SYNPO2Q9UMS6 1093 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 TACC3Q9Y6A5 838 aa28.52■■■□□ 2.16
UBE2A-205ENST00000625379 ATP2A1O14983 1001 aa28.51■■■□□ 2.15
UBE2A-205ENST00000625379 BMP3P12645 472 aa28.51■■■□□ 2.15
UBE2A-205ENST00000625379 DDX11Q96FC9 970 aa28.51■■■□□ 2.15
UBE2A-205ENST00000625379 NRBP1Q9UHY1 535 aa28.51■■■□□ 2.15
UBE2A-205ENST00000625379 NMT2O60551 498 aa28.5■■■□□ 2.15
UBE2A-205ENST00000625379 RARBP10826 455 aa28.5■■■□□ 2.15
UBE2A-205ENST00000625379 SLC39A5Q6ZMH5 540 aa28.5■■■□□ 2.15
UBE2A-205ENST00000625379 FAM227BQ96M60 508 aa28.5■■■□□ 2.15
UBE2A-205ENST00000625379 SMCHD1A6NHR9 2005 aa28.5■■■□□ 2.15
UBE2A-205ENST00000625379 TMEM232C9JQI7 657 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 PGK1P00558 417 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 ZNF865P0CJ78 1059 aaPredicted RBP28.49■■■□□ 2.15
UBE2A-205ENST00000625379 RASGRP2Q7LDG7 609 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 LNPKQ9C0E8 428 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 STX8Q9UNK0 236 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 CNPY2Q9Y2B0 182 aa28.49■■■□□ 2.15
UBE2A-205ENST00000625379 DNAJC25-GNG10A0A024R161 153 aa28.48■■■□□ 2.15
UBE2A-205ENST00000625379 A0A0D9SFI3 127 aa28.48■■■□□ 2.15
UBE2A-205ENST00000625379 TSPY2A6NKD2 308 aa28.48■■■□□ 2.15
UBE2A-205ENST00000625379 TRIM60Q495X7 471 aa28.48■■■□□ 2.15
UBE2A-205ENST00000625379 HOMER2Q9NSB8 354 aa28.48■■■□□ 2.15
UBE2A-205ENST00000625379 LAMA2P24043 3122 aaKnown RBP28.48■■■□□ 2.15
UBE2A-205ENST00000625379 MCCP23508 829 aa28.47■■■□□ 2.15
UBE2A-205ENST00000625379 LRIT3Q3SXY7 679 aa28.47■■■□□ 2.15
UBE2A-205ENST00000625379 IL17RBQ9NRM6 502 aa28.47■■■□□ 2.15
UBE2A-205ENST00000625379 HELLSQ9NRZ9 838 aa28.47■■■□□ 2.15
UBE2A-205ENST00000625379 LTBP2Q14767 1821 aa28.47■■■□□ 2.15
UBE2A-205ENST00000625379 RANBP6O60518 1105 aaKnown RBP28.46■■■□□ 2.15
UBE2A-205ENST00000625379 SNAI1O95863 264 aaPredicted RBP28.46■■■□□ 2.15
UBE2A-205ENST00000625379 AKR1A1P14550 325 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 STAT2P52630 851 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 IKQ13123 557 aaPredicted RBP28.46■■■□□ 2.15
UBE2A-205ENST00000625379 ANKRD35Q8N283 1001 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 GMCL1Q96IK5 515 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 LBHD1Q9BQE6 289 aaPredicted RBP28.46■■■□□ 2.15
UBE2A-205ENST00000625379 PRDM5Q9NQX1 630 aaPredicted RBP28.46■■■□□ 2.15
UBE2A-205ENST00000625379 PRKAG2Q9UGJ0 569 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 COL6A3P12111 3177 aa28.46■■■□□ 2.15
UBE2A-205ENST00000625379 SLC1A4P43007 532 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 SNX17Q15036 470 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 B4GALNT3Q6L9W6 998 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 KCTD1Q719H9 257 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 FGD4Q96M96 766 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 ANAPC4Q9UJX5 808 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 ZHX1Q9UKY1 873 aaPredicted RBP28.45■■■□□ 2.14
UBE2A-205ENST00000625379 PHF24Q9UPV7 400 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 MTMR7Q9Y216 660 aa28.45■■■□□ 2.14
UBE2A-205ENST00000625379 SYNGAP1Q96PV0 1343 aa28.44■■■□□ 2.14
UBE2A-205ENST00000625379 OAZ1P54368 228 aa28.44■■■□□ 2.14
UBE2A-205ENST00000625379 NMIQ13287 307 aaPredicted RBP28.44■■■□□ 2.14
UBE2A-205ENST00000625379 RNF180Q86T96 592 aa28.44■■■□□ 2.14
UBE2A-205ENST00000625379 SNAP25P60880 206 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 MAMDC4Q6UXC1 1216 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 Q7L0L9 218 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.43■■■□□ 2.14
UBE2A-205ENST00000625379 ZNF589Q86UQ0 364 aaPredicted RBP28.43■■■□□ 2.14
UBE2A-205ENST00000625379 MSL3Q8N5Y2 521 aaKnown RBP28.43■■■□□ 2.14
UBE2A-205ENST00000625379 CHST13Q8NET6 341 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 AGBL1Q96MI9 1066 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 FBXO40Q9UH90 709 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 ZNF536O15090 1300 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 SYNRGQ9UMZ2 1314 aa28.43■■■□□ 2.14
UBE2A-205ENST00000625379 TRIM6-TRIM34B2RNG4 842 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 ADAMTS4O75173 837 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 ALX1Q15699 326 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 MCMDC2Q4G0Z9 681 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 FAM160B2Q86V87 743 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 STAG1Q8WVM7 1258 aa28.42■■■□□ 2.14
UBE2A-205ENST00000625379 PDLIM7Q9NR12 457 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms