RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 KRT86O43790 486 aa10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 CASP14P31944 242 aa10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 SYCP1Q15431 976 aa10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 NOC4LQ9BVI4 516 aaKnown RBP10.34□□□□□ -0.75
RBFOX1-223ENST00000620507 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 BBOX1O75936 387 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 ENOX2Q16206 610 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 CALCRLQ16602 461 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 RC3H1Q5TC82 1133 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 E4F1Q66K89 784 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 C3orf67Q6ZVT6 689 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 CUL5Q93034 780 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 CCDC42Q96M95 316 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 RUFY1Q96T51 708 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 JADE2Q9NQC1 790 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 KCPQ6ZWJ8 1503 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 NT5C2P49902 561 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 SEC23AQ15436 765 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 SMAP1Q8IYB5 467 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 C5P01031 1676 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 WTIPA6NIX2 430 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 CDK8P49336 464 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 RBL2Q08999 1139 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 ZNF658Q5TYW1 1059 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 C12orf60Q5U649 245 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 SLF1Q9BQI6 1058 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 USP40Q9NVE5 1235 aa10.33□□□□□ -0.76
RBFOX1-223ENST00000620507 LAD1O00515 517 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 COPB1P53618 953 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 ATP2C1P98194 919 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 FMR1Q06787 632 aaKnown RBP eCLIP10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 NFIXQ14938 502 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 CCDC122Q5T0U0 273 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 SNX29Q8TEQ0 813 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 CD209Q9NNX6 404 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 SH3GLB2Q9NR46 395 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 KIF5AQ12840 1032 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 SBK1Q52WX2 424 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 SLC10A5Q5PT55 438 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 STAG2Q8N3U4 1231 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 CPVLQ9H3G5 476 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 ARFGEF2Q9Y6D5 1785 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 ALS2Q96Q42 1657 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 CUL4BQ13620 913 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 NCAPHQ15003 741 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 MARF1Q9Y4F3 1742 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-223ENST00000620507 SCNN1DP51172 638 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 CHMP4BP1P59074 171 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 ERMNQ8TAM6 284 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 NAPGQ99747 312 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 RWDD2AQ9UIY3 292 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 ATRNO75882 1429 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 TCP10Q12799 353 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 PIGSQ96S52 555 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 BAZ2BQ9UIF8 2168 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 SLC1A4P43007 532 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 MCM6Q14566 821 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 VPS72Q15906 364 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 MAP9Q49MG5 647 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 TBCKQ8TEA7 893 aa10.31□□□□□ -0.76
RBFOX1-223ENST00000620507 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 SPDYE3A6NKU9 549 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TUBB4BP68371 445 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 ELOA2Q8IYF1 753 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TEKT1Q969V4 418 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 AK8Q96MA6 479 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 ALS2CR12Q96Q35 445 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 NUP58Q9BVL2 599 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 GDAQ9Y2T3 454 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 CNTNAP5Q8WYK1 1306 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms