RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 USP42Q9H9J4 1324 aaKnown RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 BACH1O14867 736 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 TNFAIP3P21580 790 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 RESP18Q5W5W9 173 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 B4GALNT4Q76KP1 1039 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 RPGRIP1Q96KN7 1286 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 GJB4Q9NTQ9 266 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 UTP11Q9Y3A2 253 aaKnown RBP9.25□□□□□ -0.93
ALMS1-208ENST00000620466 RFX7Q2KHR2 1363 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 ADGRB1O14514 1584 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 SH3BP5O60239 455 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 DNM2P50570 870 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 KLHL30Q0D2K2 578 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 NR5A1Q13285 461 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 IQCDQ96DY2 449 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 KCNF1Q9H3M0 494 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 KIDINS220Q9ULH0 1771 aa9.25□□□□□ -0.93
ALMS1-208ENST00000620466 NDUFAB1O14561 156 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 GAS8O95995 478 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PSMC4P43686 418 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PAK2Q13177 524 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 ZNF408Q9H9D4 720 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PCDHB6Q9Y5E3 794 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 USP27XA6NNY8 438 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 CEP104O60308 925 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 GOLGA8HP0CJ92 632 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 CLCN6P51797 869 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 HERC4Q5GLZ8 1057 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 GSDMAQ96QA5 445 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 RNF26Q9BY78 433 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 NLRC4Q9NPP4 1024 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 DYNLL1P63167 89 aaKnown RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PPLO60437 1756 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 BUB1O43683 1085 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 OR52Z1P0C646 297 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PPARDQ03181 441 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 ZSWIM5Q9P217 1185 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 SNX16P57768 344 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 SH2D4AQ9H788 454 aa9.24□□□□□ -0.93
ALMS1-208ENST00000620466 MKRN1Q9UHC7 482 aaKnown RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 CCNL1Q9UK58 526 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 EPN1Q9Y6I3 576 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-208ENST00000620466 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 BPIFA3Q9BQP9 254 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC77Q9BR77 488 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 HAUS4Q9H6D7 363 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 KCNK9Q9NPC2 374 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 SAMD15Q9P1V8 674 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 NEDD4P46934 1319 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 COL3A1P02461 1466 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 HARSP12081 509 aaKnown RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CYB5R4Q7L1T6 521 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CERS3Q8IU89 383 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 TBC1D10CQ8IV04 446 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ACRBPQ8NEB7 543 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 HYOU1Q9Y4L1 999 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 SRPRBQ9Y5M8 271 aaKnown RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ITSN1Q15811 1721 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 MCAMP43121 646 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CCDC14Q49A88 953 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ENOX1Q8TC92 643 aaKnown RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 SLC39A2Q9NP94 309 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 SEC31BQ9NQW1 1179 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 SOS2Q07890 1332 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ENC1O14682 589 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ATP2A1O14983 1001 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 INPP5BP32019 993 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 NAP1L3Q99457 506 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 TRIM31Q9BZY9 425 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 STK32BQ9NY57 414 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 AGTPBP1Q9UPW5 1226 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 MYOM1P52179 1685 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ZWINTO95229 277 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 PPFIA1Q13136 1202 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 ZNF658Q5TYW1 1059 aaPredicted RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CEP57Q86XR8 500 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 FMNL3Q8IVF7 1028 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 CNOT6LQ96LI5 555 aaKnown RBP9.23□□□□□ -0.93
ALMS1-208ENST00000620466 IL25Q9H293 177 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 GOLGA8KD6RF30 607 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 PLCB3Q01970 1234 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 RNF34Q969K3 372 aa9.23□□□□□ -0.93
ALMS1-208ENST00000620466 OVOS2A0A0J9YW53 1432 aa9.22□□□□□ -0.93
ALMS1-208ENST00000620466 OVOS2Q6IE36 1432 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms