RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ABCF2Q9UG63 623 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 GDF11O95390 407 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 KCNA10Q16322 511 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 ALYREFQ86V81 257 aaKnown RBP5.6□□□□□ -1.51
SNCA-213ENST00000618500 PLCD3Q8N3E9 789 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.6□□□□□ -1.51
SNCA-213ENST00000618500 SAMD11Q96NU1 681 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 VCPKMTQ9H867 229 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 SPC25Q9HBM1 224 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 ZEB2O60315 1214 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 SNAI1O95863 264 aaPredicted RBP5.6□□□□□ -1.51
SNCA-213ENST00000618500 ACTN1P12814 892 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 CCDC17Q96LX7 622 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 DCBLD2Q96PD2 775 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 API5Q9BZZ5 524 aaKnown RBP5.6□□□□□ -1.51
SNCA-213ENST00000618500 ARHGEF10LQ9HCE6 1279 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 FBXO40Q9UH90 709 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 SLC4A7Q9Y6M7 1214 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 ZBED9Q6R2W3 1325 aa5.6□□□□□ -1.51
SNCA-213ENST00000618500 RANBP2P49792 3224 aaKnown RBP5.6□□□□□ -1.51
SNCA-213ENST00000618500 TCF20Q9UGU0 1960 aaKnown RBP5.59□□□□□ -1.51
SNCA-213ENST00000618500 PEX10O60683 326 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 EFCAB14O75071 495 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 GNAI3P08754 354 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 CSF2RAP15509 400 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 PTPN5P54829 565 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 TMEM132BQ14DG7 1078 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 TKFCQ3LXA3 575 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 FAM178BQ8IXR5 827 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 WNT8AQ9H1J5 351 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 ABHD16BQ9H3Z7 469 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 RAI14Q9P0K7 980 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 ZNF214Q9UL59 606 aaPredicted RBP5.59□□□□□ -1.51
SNCA-213ENST00000618500 PPP1R9AQ9ULJ8 1098 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 PLIN4Q96Q06 1357 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 SCN5AQ14524 2016 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 CUL9Q8IWT3 2517 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 PROB1E7EW31 1015 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 KCNQ1P51787 676 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 TFCP2Q12800 502 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 KCTD2Q14681 263 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 LRRFIP1Q32MZ4 808 aaKnown RBP5.59□□□□□ -1.51
SNCA-213ENST00000618500 ADGRA1Q86SQ6 560 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 SESTD1Q86VW0 696 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 TRMT2AQ8IZ69 625 aaKnown RBP5.59□□□□□ -1.51
SNCA-213ENST00000618500 CHST13Q8NET6 341 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 ACER1Q8TDN7 264 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 SPOCK2Q92563 424 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 FGD4Q96M96 766 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 GNEQ9Y223 722 aaKnown RBP5.59□□□□□ -1.51
SNCA-213ENST00000618500 FAM50BQ9Y247 325 aa5.59□□□□□ -1.51
SNCA-213ENST00000618500 RBM47A0AV96 593 aaKnown RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 E9PSI1 815 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 NCK2O43639 380 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 KPNA6O60684 536 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 LPXNO60711 386 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 SUPT20HL2P0C7V6 817 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 TMEM67Q5HYA8 995 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 NEK9Q8TD19 979 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 FERMT2Q96AC1 680 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 MFSD14AQ96MC6 490 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 HIPK3Q9H422 1215 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 AATFQ9NY61 560 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNCA-213ENST00000618500 UNC80Q8N2C7 3258 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 MICAL3Q7RTP6 2002 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 VWA5AO00534 786 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 PLA2G6O60733 806 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 ASGR1P07306 291 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 ATP2A2P16615 1042 aaKnown RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 ERVK-21P61565 698 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 TAP1Q03518 808 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 ACVR2BQ13705 512 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 MICALL1Q8N3F8 863 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 RIOK1Q9BRS2 568 aaKnown RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 LRP2BPQ9P2M1 347 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 PALD1Q9ULE6 856 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 PRUNE2Q8WUY3 3088 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 SMCHD1A6NHR9 2005 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 A0A1W2PRG0 241 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 GRXCR2A6NFK2 248 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 RGS20O76081 388 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 PGK1P00558 417 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 CYP2E1P05181 493 aaPredicted RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 HERC4Q5GLZ8 1057 aaPredicted RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 ERMP1Q7Z2K6 904 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 NECAB3Q96P71 396 aaPredicted RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 TEX13BQ9BXU2 312 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 GOPCQ9HD26 462 aa5.58□□□□□ -1.52
SNCA-213ENST00000618500 NOP58Q9Y2X3 529 aaKnown RBP5.58□□□□□ -1.52
SNCA-213ENST00000618500 KIAA1671Q9BY89 1806 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 GRXCR1A8MXD5 290 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 DCXO43602 365 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 TIMM10P62072 90 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 GRB10Q13322 594 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 NCAPG2Q86XI2 1143 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms