RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
CUL4A-212ENST00000617546 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 KRT15P19012 456 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 PPP2R5AQ15172 486 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 TRIM42Q8IWZ5 723 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ARHGAP18Q8N392 663 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 AK8Q96MA6 479 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 GDAP1L1Q96MZ0 367 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 MED14O60244 1454 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ZPR1O75312 459 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 GPTP24298 496 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 DDIT3P35638 169 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ADCK5Q3MIX3 580 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 PAF1Q8N7H5 531 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 DTNBP1Q96EV8 351 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 CCDC188H7C350 402 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 STAT1P42224 750 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 TNNI2P48788 182 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 PHKBQ93100 1093 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 LSM14BQ9BX40 385 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 FMNL1O95466 1100 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 H2AFZP0C0S5 128 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 POLA2Q14181 598 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 H2AFVQ71UI9 128 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 MYOCDQ8IZQ8 938 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 GEMIN8Q9NWZ8 242 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 PGRMC1O00264 195 aaKnown RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 LMNB2Q03252 620 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 TMED8Q6PL24 325 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 TRIM31Q9BZY9 425 aa11.29□□□□□ -0.6
CUL4A-212ENST00000617546 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-212ENST00000617546 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 TAF11Q15544 211 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 FAM207AQ9NSI2 230 aaPredicted RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 SAMM50Q9Y512 469 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ADCY2Q08462 1091 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 SDCCAG8Q86SQ7 713 aaPredicted RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 NUF2Q9BZD4 464 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 SMC1BQ8NDV3 1235 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 KIF2CQ99661 725 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 TUBGCP2Q9BSJ2 902 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 EPB41L5Q9HCM4 733 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ANGPTL2Q9UKU9 493 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 LPIN2Q92539 896 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 MAK16Q9BXY0 300 aaKnown RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
CUL4A-212ENST00000617546 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
CUL4A-212ENST00000617546 LMNB1P20700 586 aa11.27□□□□□ -0.6
CUL4A-212ENST00000617546 E2F4Q16254 413 aa11.27□□□□□ -0.6
CUL4A-212ENST00000617546 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.6
CUL4A-212ENST00000617546 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.6
CUL4A-212ENST00000617546 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.6
CUL4A-212ENST00000617546 PEX19P40855 299 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 GABPB2Q8TAK5 448 aaPredicted RBP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 KRT12Q99456 494 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 GMNNO75496 209 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 CIAO1O76071 339 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 ITIH3Q06033 890 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 STRN3Q13033 797 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 LRRC8CQ8TDW0 803 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 SNX29Q8TEQ0 813 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms