RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 TNFAIP3P21580 790 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 TYW5A2RUC4 315 aaKnown RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 KRT86O43790 486 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 LMNB1P20700 586 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 HSPA4P34932 840 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 EXOC4Q96A65 974 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 AK8Q96MA6 479 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 MTA3Q9BTC8 594 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ADCY9O60503 1353 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ZNF233A6NK53 670 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 OR52Z1P0C646 297 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 UBXN1Q04323 297 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 SNAPC2Q13487 334 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 CNGA4Q8IV77 575 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 TPH2Q8IWU9 490 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 SLU7O95391 586 aaKnown RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 CPLX3Q8WVH0 158 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 MED10Q9BTT4 135 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 STIM2Q9P246 746 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ATP6V0A2Q9Y487 856 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 LONP1P36776 959 aaKnown RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 CDC42EP1Q00587 391 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ARID5AQ03989 594 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 PRPF4BQ13523 1007 aaKnown RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 SKIDA1Q1XH10 827 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 OTUD6BQ8N6M0 293 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 CD209Q9NNX6 404 aa10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF9-204ENST00000615230 GCNT3O95395 438 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 RXRAP19793 462 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 POLR2BP30876 1174 aaKnown RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 KRT40Q6A162 431 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MLKLQ8NB16 471 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 UBXN4Q92575 508 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 DAPK3O43293 454 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 EXOC3O60645 756 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 KIAA0754O94854 1291 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MECOMQ03112 1051 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 ORC2Q13416 577 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 NFIXQ14938 502 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 DYDC1Q8WWB3 177 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 RNF26Q9BY78 433 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 POLA2Q14181 598 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 ASIC2Q16515 512 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 PRR16Q569H4 304 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MST1RQ04912 1400 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 CUL4BQ13620 913 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 SEPT2Q15019 361 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 ZNF771Q7L3S4 317 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 AGBL3Q8NEM8 1001 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 ZNF577Q9BSK1 485 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 NOC4LQ9BVI4 516 aaKnown RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 LARSQ9P2J5 1176 aaKnown RBP10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 KRT10P13645 584 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 RCAN1P53805 252 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 CCDC50Q8IVM0 306 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MB21D1Q8N884 522 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 SLC7A3Q8WY07 619 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 MMP19Q99542 508 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 KCNH3Q9ULD8 1083 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 GINS2Q9Y248 185 aa10.81□□□□□ -0.68
TNFRSF9-204ENST00000615230 PNMA6FA0A0J9YX94 578 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 PFKFB2O60825 505 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 CETPP11597 493 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 GPSM2P81274 684 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 PAK1Q13153 545 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 CCDC42Q96M95 316 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 ZNF277Q9NRM2 450 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 PCDHA12Q9UN75 941 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 PXDNLA1KZ92 1463 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 KYAT1Q16773 422 aa10.8□□□□□ -0.68
TNFRSF9-204ENST00000615230 TBC1D10BQ4KMP7 808 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms