RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
SGMS1-209ENST00000609445 PLIN4Q96Q06 1357 aa19.05■□□□□ 0.64
SGMS1-209ENST00000609445 KBTBD13C9JR72 458 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 COPB2P35606 906 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 RTP1P59025 263 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 CTDSPL2Q05D32 466 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 LRRC41Q15345 812 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 VPS53Q5VIR6 699 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 TINF2Q9BSI4 451 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 RAVER2Q9HCJ3 691 aaKnown RBP19.04■□□□□ 0.64
SGMS1-209ENST00000609445 TACC3Q9Y6A5 838 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 MCM3APO60318 1980 aa19.04■□□□□ 0.64
SGMS1-209ENST00000609445 PDE1AP54750 535 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-209ENST00000609445 SLFN13Q68D06 897 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 GMCL1P1Q8NEA9 526 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 FERMT2Q96AC1 680 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 FEM1BQ9UK73 627 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 ATP11BQ9Y2G3 1177 aa19.03■□□□□ 0.64
SGMS1-209ENST00000609445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.03■□□□□ 0.64
SGMS1-209ENST00000609445 CTDP1Q9Y5B0 961 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-209ENST00000609445 ZBED4O75132 1171 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 SLC3A2P08195 630 aaKnown RBP19.02■□□□□ 0.64
SGMS1-209ENST00000609445 ADCYAP1R1P41586 468 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 SLC39A5Q6ZMH5 540 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 TDHQ8IZJ6 230 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 LENG1Q96BZ8 264 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-209ENST00000609445 EVI5LQ96CN4 794 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 SLC38A10Q9HBR0 1119 aa19.02■□□□□ 0.64
SGMS1-209ENST00000609445 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.64
SGMS1-209ENST00000609445 DIS3Q9Y2L1 958 aaKnown RBP19.02■□□□□ 0.64
SGMS1-209ENST00000609445 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
SGMS1-209ENST00000609445 ZNF865P0CJ78 1059 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-209ENST00000609445 BMP3P12645 472 aa19.01■□□□□ 0.63
SGMS1-209ENST00000609445 DDX11Q96FC9 970 aa19.01■□□□□ 0.63
SGMS1-209ENST00000609445 XPNPEP3Q9NQH7 507 aa19.01■□□□□ 0.63
SGMS1-209ENST00000609445 NRBP1Q9UHY1 535 aa19.01■□□□□ 0.63
SGMS1-209ENST00000609445 SYNPO2Q9UMS6 1093 aa19.01■□□□□ 0.63
SGMS1-209ENST00000609445 DNAJC25-GNG10A0A024R161 153 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 TMEM232C9JQI7 657 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 ATP2A1O14983 1001 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 NMT2O60551 498 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 PGK1P00558 417 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 RARBP10826 455 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 FAM227BQ96M60 508 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 LNPKQ9C0E8 428 aa19■□□□□ 0.63
SGMS1-209ENST00000609445 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 TSPY2A6NKD2 308 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 LRIT3Q3SXY7 679 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 TRIM60Q495X7 471 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 STX8Q9UNK0 236 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
SGMS1-209ENST00000609445 SNAI1O95863 264 aaPredicted RBP18.98■□□□□ 0.63
SGMS1-209ENST00000609445 AKR1A1P14550 325 aa18.98■□□□□ 0.63
SGMS1-209ENST00000609445 MCCP23508 829 aa18.98■□□□□ 0.63
SGMS1-209ENST00000609445 FGD4Q96M96 766 aa18.98■□□□□ 0.63
SGMS1-209ENST00000609445 LBHD1Q9BQE6 289 aaPredicted RBP18.98■□□□□ 0.63
SGMS1-209ENST00000609445 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
SGMS1-209ENST00000609445 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
SGMS1-209ENST00000609445 RANBP6O60518 1105 aaKnown RBP18.97■□□□□ 0.63
SGMS1-209ENST00000609445 SLC1A4P43007 532 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 STAT2P52630 851 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 SNAP25P60880 206 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 IKQ13123 557 aaPredicted RBP18.97■□□□□ 0.63
SGMS1-209ENST00000609445 SNX17Q15036 470 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 KCTD1Q719H9 257 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 ANKRD35Q8N283 1001 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 GMCL1Q96IK5 515 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 PRDM5Q9NQX1 630 aaPredicted RBP18.97■□□□□ 0.63
SGMS1-209ENST00000609445 PRKAG2Q9UGJ0 569 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 ANAPC4Q9UJX5 808 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 ZHX1Q9UKY1 873 aaPredicted RBP18.97■□□□□ 0.63
SGMS1-209ENST00000609445 PHF24Q9UPV7 400 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 MTMR7Q9Y216 660 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
SGMS1-209ENST00000609445 OAZ1P54368 228 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 NMIQ13287 307 aaPredicted RBP18.96■□□□□ 0.63
SGMS1-209ENST00000609445 ALX1Q15699 326 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 Q7L0L9 218 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.636e-6■■■□□ 14.6
SGMS1-209ENST00000609445 RNF180Q86T96 592 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 ZNF589Q86UQ0 364 aaPredicted RBP18.96■□□□□ 0.63
SGMS1-209ENST00000609445 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 STAG1Q8WVM7 1258 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 AGBL1Q96MI9 1066 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 FBXO40Q9UH90 709 aa18.96■□□□□ 0.63
SGMS1-209ENST00000609445 TRIM6-TRIM34B2RNG4 842 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 ORC4O43929 436 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 ADAMTS4O75173 837 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 FGAP02671 866 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 IRX5P78411 483 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-209ENST00000609445 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 MCMDC2Q4G0Z9 681 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 SH3RF1Q7Z6J0 888 aa18.95■□□□□ 0.62
SGMS1-209ENST00000609445 FAM160B2Q86V87 743 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms