RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 CNPY2Q9Y2B0 182 aa28.98■■■□□ 2.23
SNX5-219ENST00000606602 RIPK3Q9Y572 518 aa28.98■■■□□ 2.23
SNX5-219ENST00000606602 COL11A1P12107 1806 aaPredicted RBP28.98■■■□□ 2.23
SNX5-219ENST00000606602 TTLL1O95922 423 aa28.97■■■□□ 2.23
SNX5-219ENST00000606602 PDE4BQ07343 736 aa28.97■■■□□ 2.23
SNX5-219ENST00000606602 ZMYM1Q5SVZ6 1142 aa28.97■■■□□ 2.23
SNX5-219ENST00000606602 LRRC47Q8N1G4 583 aaKnown RBP28.97■■■□□ 2.23
SNX5-219ENST00000606602 PRDM5Q9NQX1 630 aaPredicted RBP28.97■■■□□ 2.23
SNX5-219ENST00000606602 SLC3A2P08195 630 aaKnown RBP28.96■■■□□ 2.23
SNX5-219ENST00000606602 TSPY3P0CV98 308 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 TSPY8P0CW00 308 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 MX1P20591 662 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 RNF180Q86T96 592 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 NEDD1Q8NHV4 660 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 FEM1BQ9UK73 627 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 SYNPO2Q9UMS6 1093 aa28.96■■■□□ 2.23
SNX5-219ENST00000606602 ATP2A1O14983 1001 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 PGK1P00558 417 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 ZNF865P0CJ78 1059 aaPredicted RBP28.95■■■□□ 2.22
SNX5-219ENST00000606602 AKR1A1P14550 325 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 SNX17Q15036 470 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 SLC17A8Q8NDX2 589 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 GMCL1P1Q8NEA9 526 aa28.95■■■□□ 2.22
SNX5-219ENST00000606602 RAVER2Q9HCJ3 691 aaKnown RBP28.95■■■□□ 2.22
SNX5-219ENST00000606602 TFAP4Q01664 338 aa28.94■■■□□ 2.22
SNX5-219ENST00000606602 PPARAQ07869 468 aa28.94■■■□□ 2.22
SNX5-219ENST00000606602 SLC38A10Q9HBR0 1119 aa28.94■■■□□ 2.22
SNX5-219ENST00000606602 ZBTB47Q9UFB7 747 aaPredicted RBP28.94■■■□□ 2.22
SNX5-219ENST00000606602 PHF24Q9UPV7 400 aa28.94■■■□□ 2.22
SNX5-219ENST00000606602 SLFN13Q68D06 897 aa28.93■■■□□ 2.22
SNX5-219ENST00000606602 MSL3Q8N5Y2 521 aaKnown RBP28.93■■■□□ 2.22
SNX5-219ENST00000606602 ISY1Q9ULR0 285 aaKnown RBP28.93■■■□□ 2.22
SNX5-219ENST00000606602 DNAJC25-GNG10A0A024R161 153 aa28.92■■■□□ 2.22
SNX5-219ENST00000606602 BMP3P12645 472 aa28.92■■■□□ 2.22
SNX5-219ENST00000606602 RRP1P56182 461 aaKnown RBP28.92■■■□□ 2.22
SNX5-219ENST00000606602 C1orf53Q5VUE5 145 aa28.92■■■□□ 2.22
SNX5-219ENST00000606602 LENG1Q96BZ8 264 aaPredicted RBP28.92■■■□□ 2.22
SNX5-219ENST00000606602 MTMR10Q9NXD2 777 aa28.92■■■□□ 2.22
SNX5-219ENST00000606602 ZNFX1Q9P2E3 1918 aaKnown RBP28.92■■■□□ 2.22
SNX5-219ENST00000606602 SYNGAP1Q96PV0 1343 aa28.92■■■□□ 2.22
SNX5-219ENST00000606602 PLIN4Q96Q06 1357 aa28.91■■■□□ 2.22
SNX5-219ENST00000606602 TLE2Q04725 743 aa28.91■■■□□ 2.22
SNX5-219ENST00000606602 ANKRD35Q8N283 1001 aa28.91■■■□□ 2.22
SNX5-219ENST00000606602 PDLIM7Q9NR12 457 aa28.91■■■□□ 2.22
SNX5-219ENST00000606602 COL6A3P12111 3177 aa28.91■■■□□ 2.22
SNX5-219ENST00000606602 SNAI1O95863 264 aaPredicted RBP28.9■■■□□ 2.22
SNX5-219ENST00000606602 ANKRD45Q5TZF3 282 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 MAMDC4Q6UXC1 1216 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 CCDC129Q6ZRS4 1044 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 SH3RF1Q7Z6J0 888 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 BADQ92934 168 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 FBXO40Q9UH90 709 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 ZHX1Q9UKY1 873 aaPredicted RBP28.9■■■□□ 2.22
SNX5-219ENST00000606602 FAM184BQ9ULE4 1060 aa28.9■■■□□ 2.22
SNX5-219ENST00000606602 TMEM232C9JQI7 657 aa28.89■■■□□ 2.22
SNX5-219ENST00000606602 OAZ1P54368 228 aa28.89■■■□□ 2.22
SNX5-219ENST00000606602 ZNF467Q7Z7K2 595 aaPredicted RBP28.89■■■□□ 2.22
SNX5-219ENST00000606602 CHST13Q8NET6 341 aa28.89■■■□□ 2.22
SNX5-219ENST00000606602 SALL3Q9BXA9 1300 aa28.89■■■□□ 2.21
SNX5-219ENST00000606602 A0A1W2PQ45 241 aaPredicted RBP28.88■■■□□ 2.21
SNX5-219ENST00000606602 A0A1W2PQY0 241 aa28.88■■■□□ 2.21
SNX5-219ENST00000606602 TRIM43BA6NCK2 446 aa28.88■■■□□ 2.21
SNX5-219ENST00000606602 ADAMTS4O75173 837 aa28.88■■■□□ 2.21
SNX5-219ENST00000606602 TRIM43Q96BQ3 446 aaPredicted RBP28.88■■■□□ 2.21
SNX5-219ENST00000606602 CHMP4CQ96CF2 233 aa28.88■■■□□ 2.21
SNX5-219ENST00000606602 STXBP5LQ9Y2K9 1186 aa28.88■■■□□ 2.21
SNX5-219ENST00000606602 FDX1P10109 184 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 STAT2P52630 851 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 CTDSPL2Q05D32 466 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 IKQ13123 557 aaPredicted RBP28.87■■■□□ 2.21
SNX5-219ENST00000606602 SHHQ15465 462 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.87■■■□□ 2.21
SNX5-219ENST00000606602 GMCL1Q96IK5 515 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 CRBNQ96SW2 442 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 HOMER2Q9NSB8 354 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 STX8Q9UNK0 236 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 TACC3Q9Y6A5 838 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 PLXNA1Q9UIW2 1896 aa28.87■■■□□ 2.21
SNX5-219ENST00000606602 TSPY2A6NKD2 308 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 FOXP2O15409 715 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 SLC1A4P43007 532 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 ACVR2BQ13705 512 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 PPP4R3BQ5MIZ7 849 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 CHURC1Q8WUH1 139 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 TSEN34Q9BSV6 310 aaKnown RBP28.86■■■□□ 2.21
SNX5-219ENST00000606602 INCENPQ9NQS7 918 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.86■■■□□ 2.21
SNX5-219ENST00000606602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.86■■■□□ 2.21
SNX5-219ENST00000606602 SYNRGQ9UMZ2 1314 aa28.86■■■□□ 2.21
SNX5-219ENST00000606602 MYH4Q9Y623 1939 aa28.85■■■□□ 2.21
SNX5-219ENST00000606602 MCCP23508 829 aa28.85■■■□□ 2.21
SNX5-219ENST00000606602 ACLYP53396 1101 aa28.85■■■□□ 2.21
SNX5-219ENST00000606602 FAM160B2Q86V87 743 aa28.85■■■□□ 2.21
SNX5-219ENST00000606602 EVI5LQ96CN4 794 aa28.85■■■□□ 2.21
SNX5-219ENST00000606602 SMCHD1A6NHR9 2005 aa28.84■■■□□ 2.21
SNX5-219ENST00000606602 POTEB2H3BUK9 544 aa28.84■■■□□ 2.21
SNX5-219ENST00000606602 PQBP1O60828 265 aaKnown RBP28.84■■■□□ 2.21
SNX5-219ENST00000606602 CLTBP09497 229 aa28.84■■■□□ 2.21
SNX5-219ENST00000606602 C9orf50Q5SZB4 431 aa28.84■■■□□ 2.21
SNX5-219ENST00000606602 STAG1Q8WVM7 1258 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms