RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 NOSTRINQ8IVI9 506 aa25.7■■□□□ 1.7
PPFIA3-212ENST00000602897 REM2Q8IYK8 340 aaPredicted RBP25.7■■□□□ 1.7
PPFIA3-212ENST00000602897 PHF20Q9BVI0 1012 aa25.7■■□□□ 1.7
PPFIA3-212ENST00000602897 KANSL2Q9H9L4 492 aa25.7■■□□□ 1.7
PPFIA3-212ENST00000602897 TMEM63CQ9P1W3 806 aa25.7■■□□□ 1.7
PPFIA3-212ENST00000602897 ASPRV1Q53RT3 343 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 SPRYD7Q5W111 196 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 DIS3L2Q8IYB7 885 aaKnown RBP25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 KCNG4Q8TDN1 519 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 BRMS1Q9HCU9 246 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 PRDM10Q9NQV6 1147 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 NYAP2Q9P242 653 aa25.69■■□□□ 1.7
PPFIA3-212ENST00000602897 KLRF2D3W0D1 207 aa25.68■■□□□ 1.7
PPFIA3-212ENST00000602897 TMEM179Q6ZVK1 233 aa25.68■■□□□ 1.7
PPFIA3-212ENST00000602897 MKL1Q969V6 931 aa25.68■■□□□ 1.7
PPFIA3-212ENST00000602897 CLIP2Q9UDT6 1046 aa25.68■■□□□ 1.7
PPFIA3-212ENST00000602897 FSD2A1L4K1 749 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 GOLGA6L3A6NEY3 463 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 SNHG28P0DPA3 235 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 CCDC183Q5T5S1 534 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 ANO1Q5XXA6 986 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 STAG2Q8N3U4 1231 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 LINC00301Q8NCQ3 95 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 KCNJ14Q9UNX9 436 aa25.67■■□□□ 1.7
PPFIA3-212ENST00000602897 MPHOSPH10O00566 681 aaKnown RBP25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 TBC1D12O60347 775 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 L1TD1Q5T7N2 865 aaKnown RBP25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 DCAF15Q66K64 600 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 SYNPO2Q9UMS6 1093 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 BTBD18B2RXH4 712 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 CALML3P27482 149 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 KRT2P35908 639 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 MAP3K9P80192 1104 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 RILPL1Q5EBL4 403 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 MIGA2Q7L4E1 593 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.66■■□□□ 1.73e-7■■■□□ 16.8
PPFIA3-212ENST00000602897 WNK4Q96J92 1243 aa25.66■■□□□ 1.7
PPFIA3-212ENST00000602897 PDHBP11177 359 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 STK38Q15208 465 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 GALNT17Q6IS24 598 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 PGBD1Q96JS3 809 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 ELP3Q9H9T3 547 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 RNF186Q9NXI6 227 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 VPS54Q9P1Q0 977 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 CSADQ9Y600 493 aa25.65■■□□□ 1.7
PPFIA3-212ENST00000602897 TRPA1O75762 1119 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 ZBTB48P10074 688 aaPredicted RBP25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 CEBPZQ03701 1054 aaKnown RBP25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 VGLL4Q14135 290 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 SLC39A14Q15043 492 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 ABCB5Q2M3G0 1257 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 WRNIP1Q96S55 665 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 CABP5Q9NP86 173 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 CLIC4Q9Y696 253 aa25.64■■□□□ 1.7
PPFIA3-212ENST00000602897 SREBF2Q12772 1141 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 GPATCH4Q5T3I0 446 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 ADALQ6DHV7 355 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 SAGE1Q9NXZ1 904 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 A0A1W2PQ27 194 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 A0A1W2PQ64 194 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 A0A1W2PQD8 194 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 hCG_1984214I3L0E3 225 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 SPTLC2O15270 562 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 TM4SF4P48230 202 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 SF3A1Q15459 793 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 ZNF713Q8N859 430 aaPredicted RBP25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 CCDC148Q8NFR7 591 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 RRP36Q96EU6 259 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 ZNF341Q9BYN7 854 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 RIOX1Q9H6W3 641 aa25.63■■□□□ 1.69
PPFIA3-212ENST00000602897 USP17L5A8MUK1 530 aa25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 CYTH3O43739 400 aa25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 PPP6R2O75170 966 aa25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 ME1P48163 572 aa25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 USP17L2Q6R6M4 530 aa25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 DDX19AQ9NUU7 478 aaKnown RBP25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 MORC2Q9Y6X9 1032 aaPredicted RBP25.62■■□□□ 1.69
PPFIA3-212ENST00000602897 hCG_1642624A0A1W2PR95 340 aa25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 NLRP5P59047 1200 aa25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 MAP3K10Q02779 954 aa25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 BICD2Q8TD16 824 aa25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 CCDC12Q8WUD4 166 aaPredicted RBP25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 ZKSCAN4Q969J2 545 aaPredicted RBP25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 OPTNQ96CV9 577 aa25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 FTOQ9C0B1 505 aaKnown RBP eCLIP25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.61■■□□□ 1.69
PPFIA3-212ENST00000602897 MANSC4A6NHS7 340 aaPredicted RBP25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 GJA5P36382 358 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 ZNF543Q08ER8 600 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 LRSAM1Q6UWE0 723 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 TNS4Q8IZW8 715 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 LRRC47Q8N1G4 583 aaKnown RBP25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 DCAF4Q8WV16 495 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 SHISA4Q96DD7 197 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 BARHL2Q9NY43 387 aa25.6■■□□□ 1.69
PPFIA3-212ENST00000602897 OTOFQ9HC10 1997 aa25.59■■□□□ 1.69
PPFIA3-212ENST00000602897 FAM196BA6NMK8 535 aa25.59■■□□□ 1.69
PPFIA3-212ENST00000602897 GOLGA8HP0CJ92 632 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms