RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
USE1-210ENST00000601662 ENAHQ8N8S7 591 aaPredicted RBP16.88■□□□□ 0.29
USE1-210ENST00000601662 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
USE1-210ENST00000601662 BRF1Q92994 677 aa16.88■□□□□ 0.29
USE1-210ENST00000601662 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
USE1-210ENST00000601662 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
USE1-210ENST00000601662 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
USE1-210ENST00000601662 HOXC10Q9NYD6 342 aa16.88■□□□□ 0.29
USE1-210ENST00000601662 RABGAP1Q9Y3P9 1069 aa16.88■□□□□ 0.29
USE1-210ENST00000601662 DOCK3Q8IZD9 2030 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 WDR46O15213 610 aaKnown RBP16.87■□□□□ 0.29
USE1-210ENST00000601662 NMT2O60551 498 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 CNMDO75829 334 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 NOVP48745 357 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 FLT3LGP49771 235 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 COL9A3Q14050 684 aaPredicted RBP16.87■□□□□ 0.29
USE1-210ENST00000601662 FAM83BQ5T0W9 1011 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 ZNF274Q96GC6 653 aaPredicted RBP16.87■□□□□ 0.29
USE1-210ENST00000601662 PORCNQ9H237 461 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 BTBD7Q9P203 1132 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 BIN2Q9UBW5 565 aaPredicted RBP16.87■□□□□ 0.29
USE1-210ENST00000601662 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
USE1-210ENST00000601662 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 STX8Q9UNK0 236 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 MTMR7Q9Y216 660 aa16.87■□□□□ 0.29
USE1-210ENST00000601662 NDUFB10O96000 172 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 CALM1P0DP23 149 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 CALM2P0DP24 149 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 CALM3P0DP25 149 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 TOP1P11387 765 aaKnown RBP16.86■□□□□ 0.29
USE1-210ENST00000601662 PLS1Q14651 629 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 MKL1Q969V6 931 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 ATG4CQ96DT6 458 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
USE1-210ENST00000601662 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
USE1-210ENST00000601662 MGAMO43451 1857 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 GRK4P32298 578 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 DSG3P32926 999 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 RCAN1P53805 252 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 SLFN13Q68D06 897 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 RCSD1Q6JBY9 416 aa16.85■□□□□ 0.29
USE1-210ENST00000601662 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 K7ELQ4 463 aaPredicted RBP16.84■□□□□ 0.29
USE1-210ENST00000601662 ADCY3O60266 1144 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 ELNP15502 786 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 CCNA1P78396 465 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
USE1-210ENST00000601662 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
USE1-210ENST00000601662 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
USE1-210ENST00000601662 GREB1LQ9C091 1923 aaPredicted RBP16.84■□□□□ 0.29
USE1-210ENST00000601662 ZBTB43O43298 467 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
USE1-210ENST00000601662 DDAH1O94760 285 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 CYP2B6P20813 491 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
USE1-210ENST00000601662 MAPK4P31152 587 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 KIAA0100Q14667 2235 aaKnown RBP16.83■□□□□ 0.28
USE1-210ENST00000601662 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 GPR142Q7Z601 462 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 PLEKHH3Q7Z736 793 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 ZNF333Q96JL9 665 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
USE1-210ENST00000601662 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
USE1-210ENST00000601662 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
USE1-210ENST00000601662 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
USE1-210ENST00000601662 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 NOL8Q76FK4 1167 aaKnown RBP16.82■□□□□ 0.28
USE1-210ENST00000601662 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 GJD2Q9UKL4 321 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 PPP1R9AQ9ULJ8 1098 aa16.82■□□□□ 0.28
USE1-210ENST00000601662 PFKFB2O60825 505 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 BMP3P12645 472 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 IKQ13123 557 aaPredicted RBP16.81■□□□□ 0.28
USE1-210ENST00000601662 IRF5Q13568 498 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 ME3Q16798 604 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 GMCL1P1Q8NEA9 526 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 KIFC2Q96AC6 838 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 NUDT12Q9BQG2 462 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 SLF1Q9BQI6 1058 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
USE1-210ENST00000601662 MOV10L1Q9BXT6 1211 aaKnown RBP16.81■□□□□ 0.28
USE1-210ENST00000601662 SPATC1LQ9H0A9 340 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms