RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 DCTPP1Q9H773 170 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 STRN3Q13033 797 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 ENAHQ8N8S7 591 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 DCTN3O75935 186 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 ANKRD42Q8N9B4 389 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 VPS16Q9H269 839 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 KPNA2P52292 529 aaKnown RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 GNGT2O14610 69 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
SHANK2-218ENST00000601538 TMCC1O94876 653 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 FAM186BQ8IYM0 893 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 PDE4DQ08499 809 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 RNF34Q969K3 372 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
SHANK2-218ENST00000601538 TMEM63CQ9P1W3 806 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
SHANK2-218ENST00000601538 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
SHANK2-218ENST00000601538 YY1P25490 414 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 ADCY8P40145 1251 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 RNASE9P60153 205 aaKnown RBP13.35□□□□□ -0.27
SHANK2-218ENST00000601538 STX1BP61266 288 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 OR8K1Q8NGG5 319 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 ICA1Q05084 483 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 IKBKBO14920 756 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 ANKRD35Q8N283 1001 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 PYGBP11216 843 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-218ENST00000601538 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 KLHL29Q96CT2 875 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
SHANK2-218ENST00000601538 CORO7P57737 925 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 RAB44Q7Z6P3 723 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-218ENST00000601538 APOA1P02647 267 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 KRT10P13645 584 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 ST5P78524 1137 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-218ENST00000601538 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 E2F4Q16254 413 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 CALR3Q96L12 384 aaKnown RBP13.34□□□□□ -0.27
SHANK2-218ENST00000601538 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 ATF2P15336 505 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 BPIFA3Q9BQP9 254 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 TEX12Q9BXU0 123 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
SHANK2-218ENST00000601538 STAT1P42224 750 aa13.33□□□□□ -0.27
SHANK2-218ENST00000601538 SKOR1P84550 965 aa13.33□□□□□ -0.27
SHANK2-218ENST00000601538 SNX1Q13596 522 aa13.33□□□□□ -0.27
SHANK2-218ENST00000601538 RNF207Q6ZRF8 634 aa13.33□□□□□ -0.27
SHANK2-218ENST00000601538 MAPK13O15264 365 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 ATG16L1Q676U5 607 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 LRRC8BQ6P9F7 803 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 TRIM55Q9BYV6 548 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 CHGBP05060 677 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 SERPINB2P05120 415 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 INHBAP08476 426 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 ALDH1L1O75891 902 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 MTX1Q13505 466 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
SHANK2-218ENST00000601538 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 KLC4Q9NSK0 619 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 DNM2P50570 870 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 PPP2R2CQ9Y2T4 447 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 EFCAB14O75071 495 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 PHKBQ93100 1093 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 KIF2CQ99661 725 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.28
SHANK2-218ENST00000601538 ACBD5Q5T8D3 534 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-218ENST00000601538 TEDDM1Q5T9Z0 273 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms