RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 PDE6AP16499 860 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 MRPS5P82675 430 aaKnown RBP13.23□□□□□ -0.29
ZNF548-207ENST00000597400 KCTD2Q14681 263 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-207ENST00000597400 NKX2-4Q9H2Z4 354 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
ZNF548-207ENST00000597400 WDFY4Q6ZS81 3184 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 CTAGE5O15320 804 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 IGFBP4P22692 258 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-207ENST00000597400 TFF2Q03403 129 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.294e-6■■□□□ 12.5
ZNF548-207ENST00000597400 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 FAM122AQ96E09 287 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 FGD4Q96M96 766 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 CRNKL1Q9BZJ0 848 aaKnown RBP13.22□□□□□ -0.29
ZNF548-207ENST00000597400 ARHGEF10LQ9HCE6 1279 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
ZNF548-207ENST00000597400 ZNF532Q9HCE3 1301 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 PRKAB2O43741 272 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 CHGBP05060 677 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 ASGR1P07306 291 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
ZNF548-207ENST00000597400 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-207ENST00000597400 CYP2C18P33260 490 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 STAT3P40763 770 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 KCNQ1P51787 676 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 VWCEQ96DN2 955 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 ZHX1Q9UKY1 873 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-207ENST00000597400 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 CNPY2Q9Y2B0 182 aa13.21□□□□□ -0.29
ZNF548-207ENST00000597400 ELP1O95163 1332 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 MROH7Q68CQ1 1323 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
ZNF548-207ENST00000597400 CD4P01730 458 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-207ENST00000597400 BMP1P13497 986 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 MYOGP15173 224 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 PTGS1P23219 599 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-207ENST00000597400 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-207ENST00000597400 UPF3AQ9H1J1 476 aaKnown RBP13.2□□□□□ -0.3
ZNF548-207ENST00000597400 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
ZNF548-207ENST00000597400 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 ASTN1O14525 1302 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-207ENST00000597400 ARVCFO00192 962 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 CDK8P49336 464 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 RABGGTBP53611 331 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-207ENST00000597400 AACSQ86V21 672 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 TMEM199Q8N511 208 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF548-207ENST00000597400 KATNBL1Q9H079 304 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
ZNF548-207ENST00000597400 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-207ENST00000597400 APBB1O00213 710 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
ZNF548-207ENST00000597400 GJA9P57773 515 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 RAB30Q15771 203 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 SNRNP48Q6IEG0 339 aaKnown RBP13.18□□□□□ -0.3
ZNF548-207ENST00000597400 OTOP2Q7RTS6 562 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 MICALL1Q8N3F8 863 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
ZNF548-207ENST00000597400 WNT8AQ9H1J5 351 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-207ENST00000597400 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
ZNF548-207ENST00000597400 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-207ENST00000597400 GOLIM4O00461 696 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 MBD4O95243 580 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 RLBP1P12271 317 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 BEX3Q00994 111 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 C16orf86Q6ZW13 317 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF548-207ENST00000597400 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
ZNF548-207ENST00000597400 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 MUC6Q6W4X9 2439 aa13.16□□□□□ -0.3
ZNF548-207ENST00000597400 RFXAPO00287 272 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms