RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KRT23Q9C075 422 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 CNNM2Q9H8M5 875 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 SLC38A10Q9HBR0 1119 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 ZSWIM5Q9P217 1185 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 CYP21A2P08686 494 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 STAT2P52630 851 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 RASGRP2Q7LDG7 609 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 DGKHQ86XP1 1220 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 ABRAQ8N0Z2 381 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 CHURC1Q8WUH1 139 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 ANKS1AQ92625 1134 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 ZKSCAN3Q9BRR0 538 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 RNF208Q9H0X6 261 aa24.83■■□□□ 1.57
PNKP-209ENST00000596726 ZBED4O75132 1171 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 GJB1P08034 283 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 FDX1P10109 184 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 COPB2P35606 906 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 TRIM32Q13049 653 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 CCL14Q16627 93 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 CCDC178Q5BJE1 867 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 KCTD1Q719H9 257 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 IQCA1Q86XH1 822 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 CHMP4CQ96CF2 233 aa24.82■■□□□ 1.56
PNKP-209ENST00000596726 ZKSCAN1P17029 563 aaPredicted RBP24.81■■□□□ 1.56
PNKP-209ENST00000596726 ADORA2AP29274 412 aa24.81■■□□□ 1.56
PNKP-209ENST00000596726 MAP3K21Q5TCX8 1036 aa24.81■■□□□ 1.56
PNKP-209ENST00000596726 NPLOC4Q8TAT6 608 aa24.81■■□□□ 1.56
PNKP-209ENST00000596726 TEX13BQ9BXU2 312 aa24.81■■□□□ 1.56
PNKP-209ENST00000596726 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
PNKP-209ENST00000596726 PAK6Q9NQU5 681 aaPredicted RBP24.81■■□□□ 1.56
PNKP-209ENST00000596726 MKI67P46013 3256 aaKnown RBP24.81■■□□□ 1.56
PNKP-209ENST00000596726 IGHA2P01877 340 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 GJA8P48165 433 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 OAZ1P54368 228 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 ZSCAN10Q96SZ4 725 aaPredicted RBP24.8■■□□□ 1.56
PNKP-209ENST00000596726 PPP4R2Q9NY27 417 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 FLRT1Q9NZU1 646 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 RIPK3Q9Y572 518 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 RBM8AQ9Y5S9 174 aaKnown RBP24.8■■□□□ 1.56
PNKP-209ENST00000596726 TAF6LQ9Y6J9 622 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 RPTORQ8N122 1335 aa24.8■■□□□ 1.56
PNKP-209ENST00000596726 COBLO75128 1261 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 SNHG28P0DPA3 235 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 PDHBP11177 359 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 FCER1AP12319 257 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 SNRNP48Q6IEG0 339 aaKnown RBP24.79■■□□□ 1.56
PNKP-209ENST00000596726 BTNL9Q6UXG8 535 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 KIAA1211Q6ZU35 1233 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 SHISA4Q96DD7 197 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 ISY1Q9ULR0 285 aaKnown RBP24.79■■□□□ 1.56
PNKP-209ENST00000596726 MTMR7Q9Y216 660 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 PLXNA1Q9UIW2 1896 aa24.79■■□□□ 1.56
PNKP-209ENST00000596726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.78■■□□□ 1.56
PNKP-209ENST00000596726 DPP9Q86TI2 863 aa24.78■■□□□ 1.56
PNKP-209ENST00000596726 CPXCR1Q8N123 301 aa24.78■■□□□ 1.56
PNKP-209ENST00000596726 ENAHQ8N8S7 591 aaPredicted RBP24.78■■□□□ 1.56
PNKP-209ENST00000596726 RAVER2Q9HCJ3 691 aaKnown RBP24.78■■□□□ 1.56
PNKP-209ENST00000596726 PRR12Q9ULL5 1215 aa24.78■■□□□ 1.56
PNKP-209ENST00000596726 CTDP1Q9Y5B0 961 aaPredicted RBP24.78■■□□□ 1.56
PNKP-209ENST00000596726 E7EWF7 191 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 SGPL1O95470 568 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 PRKAR2AP13861 404 aaKnown RBP24.77■■□□□ 1.56
PNKP-209ENST00000596726 CACNB2Q08289 660 aaPredicted RBP24.77■■□□□ 1.56
PNKP-209ENST00000596726 IKQ13123 557 aaPredicted RBP24.77■■□□□ 1.56
PNKP-209ENST00000596726 CCDC96Q2M329 555 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 TTBK2Q6IQ55 1244 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 CYB5R4Q7L1T6 521 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 MMP19Q99542 508 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.77■■□□□ 1.56
PNKP-209ENST00000596726 HMX1Q9NP08 348 aaPredicted RBP24.77■■□□□ 1.56
PNKP-209ENST00000596726 ZNF536O15090 1300 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 TNKSO95271 1327 aa24.77■■□□□ 1.56
PNKP-209ENST00000596726 CDC45O75419 566 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 ZNF543Q08ER8 600 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 TRDNQ13061 729 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 SEC23AQ15436 765 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 STOX1Q6ZVD7 989 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 U2AF1L4Q8WU68 220 aaKnown RBP24.76■■□□□ 1.55
PNKP-209ENST00000596726 SMCHD1A6NHR9 2005 aa24.76■■□□□ 1.55
PNKP-209ENST00000596726 CAPN2P17655 700 aa24.75■■□□□ 1.55
PNKP-209ENST00000596726 OLFML2BQ68BL8 750 aa24.75■■□□□ 1.55
PNKP-209ENST00000596726 PNMA1Q8ND90 353 aa24.75■■□□□ 1.55
PNKP-209ENST00000596726 UBAC1Q9BSL1 405 aa24.75■■□□□ 1.55
PNKP-209ENST00000596726 SLC5A4Q9NY91 659 aa24.75■■□□□ 1.55
PNKP-209ENST00000596726 FRMPD2Q68DX3 1309 aaPredicted RBP24.75■■□□□ 1.55
PNKP-209ENST00000596726 SLC16A2P36021 539 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 KCTD2Q14681 263 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 NECTIN1Q15223 517 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 MFSD14CQ5VZR4 134 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 NCOA7Q8NI08 942 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 DEFB118Q96PH6 123 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 CRISPLD2Q9H0B8 497 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 KAT14Q9H8E8 782 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 GPCPD1Q9NPB8 672 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 ANO2Q9NQ90 1003 aa24.74■■□□□ 1.55
PNKP-209ENST00000596726 ZNF792Q3KQV3 632 aa24.73■■□□□ 1.55
PNKP-209ENST00000596726 SYDE2Q5VT97 1194 aa24.73■■□□□ 1.55
PNKP-209ENST00000596726 CHST13Q8NET6 341 aa24.73■■□□□ 1.55
PNKP-209ENST00000596726 RANBP17Q9H2T7 1088 aaKnown RBP24.73■■□□□ 1.55
PNKP-209ENST00000596726 DIS3Q9Y2L1 958 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms