RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 ALYREFQ86V81 257 aaKnown RBP13.08□□□□□ -0.32
RANBP3-230ENST00000593025 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 CD320Q9NPF0 282 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 MROH7Q68CQ1 1323 aa13.08□□□□□ -0.32
RANBP3-230ENST00000593025 DNAJC25-GNG10A0A024R161 153 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
RANBP3-230ENST00000593025 IDH1O75874 414 aaKnown RBP13.07□□□□□ -0.32
RANBP3-230ENST00000593025 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 GNAI3P08754 354 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 CYP2D6P10635 497 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 MAMDC4Q6UXC1 1216 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 OTOP2Q7RTS6 562 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
RANBP3-230ENST00000593025 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 WNT8AQ9H1J5 351 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
RANBP3-230ENST00000593025 A0A0U1RQG5 324 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-230ENST00000593025 VWA5AO00534 786 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
RANBP3-230ENST00000593025 FGBP02675 491 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 AKR1B1P15121 316 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
RANBP3-230ENST00000593025 KCTD2Q14681 263 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-230ENST00000593025 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-230ENST00000593025 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 ASTN1O14525 1302 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
RANBP3-230ENST00000593025 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 STAT3P40763 770 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 GJA9P57773 515 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 NKX3-2P78367 333 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 POLA2Q14181 598 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 DYNLL2Q96FJ2 89 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 NOC4LQ9BVI4 516 aaKnown RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
RANBP3-230ENST00000593025 PPP1R9AQ9ULJ8 1098 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 PCDHA11Q9Y5I1 949 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
RANBP3-230ENST00000593025 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
RANBP3-230ENST00000593025 TRIOO75962 3097 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 APBB1O00213 710 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 PTGS1P23219 599 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 ICA1Q05084 483 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
RANBP3-230ENST00000593025 HIPK3Q9H422 1215 aa13.04□□□□□ -0.32
RANBP3-230ENST00000593025 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 GNAI2P04899 355 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
RANBP3-230ENST00000593025 CA3P07451 260 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 CCL23P55773 120 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 BEX3Q00994 111 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
RANBP3-230ENST00000593025 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 EAF2Q96CJ1 260 aaPredicted RBP13.03□□□□□ -0.32
RANBP3-230ENST00000593025 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
RANBP3-230ENST00000593025 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
RANBP3-230ENST00000593025 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.33
RANBP3-230ENST00000593025 LPXNO60711 386 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 TTLL4Q14679 1199 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 GNASQ5JWF2 1037 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 CXCL17Q6UXB2 119 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
RANBP3-230ENST00000593025 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 SNX27Q96L92 541 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.33
RANBP3-230ENST00000593025 TRPV6Q9H1D0 765 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 MTIF3Q9H2K0 278 aaKnown RBP13.02□□□□□ -0.33
RANBP3-230ENST00000593025 ARHGEF10LQ9HCE6 1279 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
RANBP3-230ENST00000593025 COG5Q9UP83 839 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
RANBP3-230ENST00000593025 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-230ENST00000593025 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
RANBP3-230ENST00000593025 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms