RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ADAL	Q6DHV7	355 aa		17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	IPO4	Q8TEX9	1081 aa	Known RBP	17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	DPF2	Q92785	391 aa		17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	RIOX1	Q9H6W3	641 aa		17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	KANSL2	Q9H9L4	492 aa		17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	FRMPD2	Q68DX3	1309 aa	Predicted RBP	17.63	■□□□□ 0.41
DDX39A-209	ENST00000589318	MYO1B	O43795	1136 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	ABCB5	Q2M3G0	1257 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	NOM1	Q5C9Z4	860 aa	Known RBP	17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	RILPL1	Q5EBL4	403 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318		A0A1W2PQ27	194 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318		A0A1W2PQ64	194 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318		A0A1W2PQD8	194 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	STXBP3	O00186	592 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	CCAR1	Q8IX12	1150 aa	Known RBP	17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	MICALL2	Q8IY33	904 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	UBA5	Q9GZZ9	404 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	CABP5	Q9NP86	173 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	BARHL2	Q9NY43	387 aa		17.62	■□□□□ 0.41
DDX39A-209	ENST00000589318	CCDC66	A2RUB6	948 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	PPP6R2	O75170	966 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	GH2	P01242	217 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	NLRP5	P59047	1200 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	ATP2B2	Q01814	1243 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	SNW1	Q13573	536 aa	Known RBP	17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	ENGASE	Q8NFI3	743 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	DDX19A	Q9NUU7	478 aa	Known RBP	17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	TMEM51	Q9NW97	253 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	GJA3	Q9Y6H8	435 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318	SRCAP	Q6ZRS2	3230 aa		17.61	■□□□□ 0.41
DDX39A-209	ENST00000589318		M0R2N6	131 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	ICA1	Q05084	483 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	SLC20A2	Q08357	652 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	CREBRF	Q8IUR6	639 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	BRMS1	Q9HCU9	246 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	CNOT7	Q9UIV1	285 aa	Known RBP	17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	PCDHB6	Q9Y5E3	794 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	TBC1D12	O60347	775 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	MARCKS	P29966	332 aa	Predicted RBP	17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	MAP3K10	Q02779	954 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	RBM26	Q5T8P6	1007 aa	Known RBP	17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	SAMD7	Q7Z3H4	446 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	HEATR3	Q7Z4Q2	680 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	PIGS	Q96S52	555 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	FUCA2	Q9BTY2	467 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	NUP62CL	Q9H1M0	184 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	CLSTN2	Q9H4D0	955 aa		17.6	■□□□□ 0.41
DDX39A-209	ENST00000589318	WNT7A	O00755	349 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	CALML3	P27482	149 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	TTBK2	Q6IQ55	1244 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	FAM177A1	Q8N128	213 aa	Predicted RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	FSIP1	Q8NA03	581 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	DAGLB	Q8NCG7	672 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	RNF214	Q8ND24	703 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	MRPS27	Q92552	414 aa	Known RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	RRP36	Q96EU6	259 aa	Known RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	GPCPD1	Q9NPB8	672 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	SCAF8	Q9UPN6	1271 aa	Known RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	ASTN2	O75129	1339 aa	Predicted RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	GOLGA6L6	A8MZA4	724 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	FAM160A1	Q05DH4	1040 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	GPATCH4	Q5T3I0	446 aa	Known RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	RBM43	Q6ZSC3	357 aa	Known RBP	17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	ARHGAP27	Q6ZUM4	889 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	HOMER1	Q86YM7	354 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	TEPSIN	Q96N21	525 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	VAT1L	Q9HCJ6	419 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	PCDHA4	Q9UN74	947 aa		17.59	■□□□□ 0.41
DDX39A-209	ENST00000589318	ATAD5	Q96QE3	1844 aa		17.58	■□□□□ 0.41
DDX39A-209	ENST00000589318	LMNB1	P20700	586 aa		17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	RASA3	Q14644	834 aa		17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	CAMK4	Q16566	473 aa		17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	ZNF771	Q7L3S4	317 aa	Predicted RBP	17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	BLID	Q8IZY5	108 aa		17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	FMR1NB	Q8N0W7	255 aa	Predicted RBP	17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318	CCDC148	Q8NFR7	591 aa		17.58	■□□□□ 0.4
DDX39A-209	ENST00000589318		A0A1W2PRG0	241 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	KCTD1	Q719H9	257 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	ADGRF4	Q8IZF3	695 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	GMCL1P1	Q8NEA9	526 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	DCAF4	Q8WV16	495 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	MTMR8	Q96EF0	704 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	SYT17	Q9BSW7	474 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	ZMYND12	Q9H0C1	365 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	JMJD4	Q9H9V9	463 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	USP25	Q9UHP3	1055 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	MORC2	Q9Y6X9	1032 aa	Predicted RBP	17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318		A0A1B0GVL5	298 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	CMA1	P23946	247 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	NDUFA8	P51970	172 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	CCDC96	Q2M329	555 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	SLFN13	Q68D06	897 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	GALNT17	Q6IS24	598 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	SHC4	Q6S5L8	630 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	CCDC73	Q6ZRK6	1079 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	MIGA2	Q7L4E1	593 aa		17.57	■□□□□ 0.4
DDX39A-209	ENST00000589318	JMY	Q8N9B5	988 aa		17.57	■□□□□ 0.4

Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms