RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 PAK6Q9NQU5 681 aaPredicted RBP20.25■□□□□ 0.83
RFX1-203ENST00000588520 CTDP1Q9Y5B0 961 aaPredicted RBP20.25■□□□□ 0.83
RFX1-203ENST00000588520 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
RFX1-203ENST00000588520 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
RFX1-203ENST00000588520 FCER1AP12319 257 aa20.24■□□□□ 0.83
RFX1-203ENST00000588520 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
RFX1-203ENST00000588520 HMX1Q9NP08 348 aaPredicted RBP20.24■□□□□ 0.83
RFX1-203ENST00000588520 NEDD4P46934 1319 aa20.24■□□□□ 0.83
RFX1-203ENST00000588520 EN2P19622 333 aaPredicted RBP20.23■□□□□ 0.83
RFX1-203ENST00000588520 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
RFX1-203ENST00000588520 DPP9Q86TI2 863 aa20.23■□□□□ 0.83
RFX1-203ENST00000588520 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
RFX1-203ENST00000588520 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
RFX1-203ENST00000588520 UNC93B1Q9H1C4 597 aa20.23■□□□□ 0.83
RFX1-203ENST00000588520 TMEM232C9JQI7 657 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 SGPL1O95470 568 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 MYCP01106 439 aaPredicted RBP20.22■□□□□ 0.83
RFX1-203ENST00000588520 MCCP23508 829 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 ADORA2AP29274 412 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 TRDNQ13061 729 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 MFSD14CQ5VZR4 134 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
RFX1-203ENST00000588520 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.22■□□□□ 0.83
RFX1-203ENST00000588520 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
RFX1-203ENST00000588520 COL11A1P12107 1806 aaPredicted RBP20.22■□□□□ 0.83
RFX1-203ENST00000588520 KDM4AO75164 1064 aa20.21■□□□□ 0.83
RFX1-203ENST00000588520 KCTD2Q14681 263 aa20.21■□□□□ 0.83
RFX1-203ENST00000588520 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
RFX1-203ENST00000588520 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
RFX1-203ENST00000588520 MAP4K1Q92918 833 aa20.21■□□□□ 0.83
RFX1-203ENST00000588520 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
RFX1-203ENST00000588520 DIS3Q9Y2L1 958 aaKnown RBP20.21■□□□□ 0.83
RFX1-203ENST00000588520 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
RFX1-203ENST00000588520 IKQ13123 557 aaPredicted RBP20.2■□□□□ 0.82
RFX1-203ENST00000588520 SNRNP48Q6IEG0 339 aaKnown RBP20.2■□□□□ 0.82
RFX1-203ENST00000588520 BTNL9Q6UXG8 535 aa20.2■□□□□ 0.82
RFX1-203ENST00000588520 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
RFX1-203ENST00000588520 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
RFX1-203ENST00000588520 MMP19Q99542 508 aa20.2■□□□□ 0.82
RFX1-203ENST00000588520 ISY1Q9ULR0 285 aaKnown RBP20.2■□□□□ 0.82
RFX1-203ENST00000588520 BRCA2P51587 3418 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 B4E1Z4 1266 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 SNHG28P0DPA3 235 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 PDHBP11177 359 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 PTH1RQ03431 593 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 CCDC96Q2M329 555 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 TKFCQ3LXA3 575 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 GPATCH4Q5T3I0 446 aaKnown RBP20.19■□□□□ 0.82
RFX1-203ENST00000588520 ANKLE1Q8NAG6 615 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 UBAC1Q9BSL1 405 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 CRISPLD2Q9H0B8 497 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
RFX1-203ENST00000588520 MSCO60682 206 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 IGHA2P01877 340 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 CYP21A2P08686 494 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 CCL14Q16627 93 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 KCTD1Q719H9 257 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 SHISA4Q96DD7 197 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 DEFB118Q96PH6 123 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 ESYT1Q9BSJ8 1104 aa20.18■□□□□ 0.82
RFX1-203ENST00000588520 CACNB2Q08289 660 aaPredicted RBP20.17■□□□□ 0.82
RFX1-203ENST00000588520 CPXCR1Q8N123 301 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 MSL3Q8N5Y2 521 aaKnown RBP20.17■□□□□ 0.82
RFX1-203ENST00000588520 NPLOC4Q8TAT6 608 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 NRBP1Q9UHY1 535 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 PRR12Q9ULL5 1215 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 TNKSO95271 1327 aa20.17■□□□□ 0.82
RFX1-203ENST00000588520 COBLO75128 1261 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 TRIM32Q13049 653 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 RALYLQ86SE5 291 aaKnown RBP20.16■□□□□ 0.82
RFX1-203ENST00000588520 ENAHQ8N8S7 591 aaPredicted RBP20.16■□□□□ 0.82
RFX1-203ENST00000588520 PNMA1Q8ND90 353 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 NCOA7Q8NI08 942 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 MAML3Q96JK9 1138 aa20.16■□□□□ 0.82
RFX1-203ENST00000588520 RAVER2Q9HCJ3 691 aaKnown RBP20.16■□□□□ 0.82
RFX1-203ENST00000588520 CDC45O75419 566 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 TFRCP02786 760 aaKnown RBP20.15■□□□□ 0.82
RFX1-203ENST00000588520 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
RFX1-203ENST00000588520 UBE2Q1Q7Z7E8 422 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 ZKSCAN3Q9BRR0 538 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 LSG1Q9H089 658 aaKnown RBP20.15■□□□□ 0.82
RFX1-203ENST00000588520 RANBP17Q9H2T7 1088 aaKnown RBP20.15■□□□□ 0.82
RFX1-203ENST00000588520 ACAD9Q9H845 621 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 FLRT1Q9NZU1 646 aa20.15■□□□□ 0.82
RFX1-203ENST00000588520 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
RFX1-203ENST00000588520 ZNF536O15090 1300 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 ZNF792Q3KQV3 632 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 ASPRV1Q53RT3 343 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 IFIT1BQ5T764 474 aaKnown RBP20.14■□□□□ 0.81
RFX1-203ENST00000588520 SYDE2Q5VT97 1194 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 ZNF467Q7Z7K2 595 aaPredicted RBP20.14■□□□□ 0.81
RFX1-203ENST00000588520 DDX11Q96FC9 970 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
RFX1-203ENST00000588520 OGDHLQ9ULD0 1010 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms