RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GMCL1P1Q8NEA9 526 aa17.05■□□□□ 0.32
VMP1-206ENST00000587945 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
VMP1-206ENST00000587945 UBE2OQ9C0C9 1292 aaKnown RBP17.05■□□□□ 0.32
VMP1-206ENST00000587945 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
VMP1-206ENST00000587945 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
VMP1-206ENST00000587945 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
VMP1-206ENST00000587945 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
VMP1-206ENST00000587945 TACC3Q9Y6A5 838 aa17.05■□□□□ 0.32
VMP1-206ENST00000587945 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 RTP1P59025 263 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 LRRC41Q15345 812 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 FERMT2Q96AC1 680 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 SLC38A10Q9HBR0 1119 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 DIS3Q9Y2L1 958 aaKnown RBP17.04■□□□□ 0.32
VMP1-206ENST00000587945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
VMP1-206ENST00000587945 ZNF236Q9UL36 1845 aa17.04■□□□□ 0.32
VMP1-206ENST00000587945 ATP2A1O14983 1001 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 NMT2O60551 498 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 BMP3P12645 472 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
VMP1-206ENST00000587945 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 ATP11BQ9Y2G3 1177 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 MYH8P13535 1937 aa17.03■□□□□ 0.32
VMP1-206ENST00000587945 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
VMP1-206ENST00000587945 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 TSPY2A6NKD2 308 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 PGK1P00558 417 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.32
VMP1-206ENST00000587945 RARBP10826 455 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 MCCP23508 829 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 TDHQ8IZJ6 230 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 STX8Q9UNK0 236 aa17.02■□□□□ 0.32
VMP1-206ENST00000587945 DNAJC25-GNG10A0A024R161 153 aa17.01■□□□□ 0.31
VMP1-206ENST00000587945 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
VMP1-206ENST00000587945 TRIM60Q495X7 471 aa17.01■□□□□ 0.31
VMP1-206ENST00000587945 RASGRP2Q7LDG7 609 aa17.01■□□□□ 0.31
VMP1-206ENST00000587945 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
VMP1-206ENST00000587945 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
VMP1-206ENST00000587945 TRIM6-TRIM34B2RNG4 842 aa17■□□□□ 0.31
VMP1-206ENST00000587945 SNAI1O95863 264 aaPredicted RBP17■□□□□ 0.31
VMP1-206ENST00000587945 FGAP02671 866 aa17■□□□□ 0.31
VMP1-206ENST00000587945 SLC1A4P43007 532 aa17■□□□□ 0.31
VMP1-206ENST00000587945 SNAP25P60880 206 aa17■□□□□ 0.31
VMP1-206ENST00000587945 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
VMP1-206ENST00000587945 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
VMP1-206ENST00000587945 ALX1Q15699 326 aa17■□□□□ 0.31
VMP1-206ENST00000587945 KCTD1Q719H9 257 aa17■□□□□ 0.31
VMP1-206ENST00000587945 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
VMP1-206ENST00000587945 ANKRD35Q8N283 1001 aa17■□□□□ 0.31
VMP1-206ENST00000587945 GMCL1Q96IK5 515 aa17■□□□□ 0.31
VMP1-206ENST00000587945 LBHD1Q9BQE6 289 aaPredicted RBP17■□□□□ 0.31
VMP1-206ENST00000587945 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
VMP1-206ENST00000587945 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
VMP1-206ENST00000587945 IGHDP01880 384 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 AKR1A1P14550 325 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 STAT2P52630 851 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 RRP12Q5JTH9 1297 aaKnown RBP16.99■□□□□ 0.31
VMP1-206ENST00000587945 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 FGD4Q96M96 766 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 AGBL1Q96MI9 1066 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 PRDM5Q9NQX1 630 aaPredicted RBP16.99■□□□□ 0.31
VMP1-206ENST00000587945 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
VMP1-206ENST00000587945 ZHX1Q9UKY1 873 aaPredicted RBP16.99■□□□□ 0.31
VMP1-206ENST00000587945 ZNF536O15090 1300 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 PARP14Q460N5 1801 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 HSPD1P10809 573 aaKnown RBP16.98■□□□□ 0.31
VMP1-206ENST00000587945 OAZ1P54368 228 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 SNX17Q15036 470 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 MAMDC4Q6UXC1 1216 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 RNF180Q86T96 592 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 FAM160B2Q86V87 743 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 MSL3Q8N5Y2 521 aaKnown RBP16.98■□□□□ 0.31
VMP1-206ENST00000587945 CHURC1Q8WUH1 139 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
VMP1-206ENST00000587945 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 PHF24Q9UPV7 400 aa16.98■□□□□ 0.31
VMP1-206ENST00000587945 ORC4O43929 436 aa16.97■□□□□ 0.31
VMP1-206ENST00000587945 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
VMP1-206ENST00000587945 FGRP09769 529 aa16.97■□□□□ 0.31
VMP1-206ENST00000587945 HAND2P61296 217 aa16.97■□□□□ 0.31
VMP1-206ENST00000587945 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
VMP1-206ENST00000587945 CNTN2Q02246 1040 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms