RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TINF2Q9BSI4 451 aa24.29■■□□□ 1.48
TOP3A-219ENST00000584887 SALL3Q9BXA9 1300 aa24.29■■□□□ 1.48
TOP3A-219ENST00000584887 SLFN13Q68D06 897 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 TDHQ8IZJ6 230 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 LBHD1Q9BQE6 289 aaPredicted RBP24.28■■□□□ 1.48
TOP3A-219ENST00000584887 RAVER2Q9HCJ3 691 aaKnown RBP24.28■■□□□ 1.48
TOP3A-219ENST00000584887 PRKAG2Q9UGJ0 569 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 RIPK3Q9Y572 518 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 PLIN4Q96Q06 1357 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 PLXNA1Q9UIW2 1896 aa24.28■■□□□ 1.48
TOP3A-219ENST00000584887 RARBP10826 455 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 TAL1P17542 331 aaPredicted RBP24.27■■□□□ 1.48
TOP3A-219ENST00000584887 CTDSPL2Q05D32 466 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 LRRC41Q15345 812 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 GMCL1P1Q8NEA9 526 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 MKL1Q969V6 931 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 FERMT2Q96AC1 680 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 EVI5LQ96CN4 794 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 NRBP1Q9UHY1 535 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 FEM1BQ9UK73 627 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 CNPY2Q9Y2B0 182 aa24.27■■□□□ 1.48
TOP3A-219ENST00000584887 DIS3Q9Y2L1 958 aaKnown RBP24.27■■□□□ 1.48
TOP3A-219ENST00000584887 ADCYAP1R1P41586 468 aa24.26■■□□□ 1.47
TOP3A-219ENST00000584887 IKQ13123 557 aaPredicted RBP24.26■■□□□ 1.47
TOP3A-219ENST00000584887 XPNPEP3Q9NQH7 507 aa24.26■■□□□ 1.47
TOP3A-219ENST00000584887 SMCHD1A6NHR9 2005 aa24.26■■□□□ 1.47
TOP3A-219ENST00000584887 TSPY2A6NKD2 308 aa24.25■■□□□ 1.47
TOP3A-219ENST00000584887 BMP3P12645 472 aa24.25■■□□□ 1.47
TOP3A-219ENST00000584887 PDE1AP54750 535 aa24.25■■□□□ 1.47
TOP3A-219ENST00000584887 HDAC1Q13547 482 aaPredicted RBP24.25■■□□□ 1.47
TOP3A-219ENST00000584887 LENG1Q96BZ8 264 aaPredicted RBP24.25■■□□□ 1.47
TOP3A-219ENST00000584887 SLC38A10Q9HBR0 1119 aa24.25■■□□□ 1.47
TOP3A-219ENST00000584887 PRDM5Q9NQX1 630 aaPredicted RBP24.25■■□□□ 1.47
TOP3A-219ENST00000584887 SYNPO2Q9UMS6 1093 aa24.25■■□□□ 1.47
TOP3A-219ENST00000584887 TMEM232C9JQI7 657 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 FOXP2O15409 715 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 PGK1P00558 417 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 VPS53Q5VIR6 699 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 SLC39A5Q6ZMH5 540 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 INCENPQ9NQS7 918 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 HOMER2Q9NSB8 354 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 STX8Q9UNK0 236 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 MTMR7Q9Y216 660 aa24.24■■□□□ 1.47
TOP3A-219ENST00000584887 TRIM60Q495X7 471 aa24.23■■□□□ 1.47
TOP3A-219ENST00000584887 LNPKQ9C0E8 428 aa24.23■■□□□ 1.47
TOP3A-219ENST00000584887 TOMM22Q9NS69 142 aa24.23■■□□□ 1.47
TOP3A-219ENST00000584887 ZHX1Q9UKY1 873 aaPredicted RBP24.23■■□□□ 1.47
TOP3A-219ENST00000584887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.23■■□□□ 1.47
TOP3A-219ENST00000584887 ATP2A1O14983 1001 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 RANBP6O60518 1105 aaKnown RBP24.22■■□□□ 1.47
TOP3A-219ENST00000584887 ZNF865P0CJ78 1059 aaPredicted RBP24.22■■□□□ 1.47
TOP3A-219ENST00000584887 AKR1A1P14550 325 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 MCCP23508 829 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 SLC1A4P43007 532 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 PPP4R3BQ5MIZ7 849 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 ANKRD35Q8N283 1001 aa24.22■■□□□ 1.47
TOP3A-219ENST00000584887 TRIM6-TRIM34B2RNG4 842 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 NMT2O60551 498 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 STAT2P52630 851 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 LRIT3Q3SXY7 679 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 RNF180Q86T96 592 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 FAM227BQ96M60 508 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 HELLSQ9NRZ9 838 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 FBXO40Q9UH90 709 aa24.21■■□□□ 1.47
TOP3A-219ENST00000584887 DNAJC25-GNG10A0A024R161 153 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 A0A0D9SFI3 127 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 B4GALNT3Q6L9W6 998 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 FAM160B2Q86V87 743 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 MSL3Q8N5Y2 521 aaKnown RBP24.2■■□□□ 1.46
TOP3A-219ENST00000584887 CHST13Q8NET6 341 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 CHURC1Q8WUH1 139 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 GMCL1Q96IK5 515 aa24.2■■□□□ 1.46
TOP3A-219ENST00000584887 SYNGAP1Q96PV0 1343 aa24.19■■□□□ 1.46
TOP3A-219ENST00000584887 SNAI1O95863 264 aaPredicted RBP24.19■■□□□ 1.46
TOP3A-219ENST00000584887 OAZ1P54368 228 aa24.19■■□□□ 1.46
TOP3A-219ENST00000584887 RRP12Q5JTH9 1297 aaKnown RBP24.19■■□□□ 1.46
TOP3A-219ENST00000584887 KCTD1Q719H9 257 aa24.19■■□□□ 1.46
TOP3A-219ENST00000584887 STAG1Q8WVM7 1258 aa24.19■■□□□ 1.46
TOP3A-219ENST00000584887 PHF24Q9UPV7 400 aa24.19■■□□□ 1.46
TOP3A-219ENST00000584887 SNAP25P60880 206 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 CCDC96Q2M329 555 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 MCMDC2Q4G0Z9 681 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 CCDC174Q6PII3 467 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 Q7L0L9 218 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 RASGRP2Q7LDG7 609 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 DEFB123Q8N688 67 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 IL17RBQ9NRM6 502 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 FAM184BQ9ULE4 1060 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 TACC3Q9Y6A5 838 aa24.18■■□□□ 1.46
TOP3A-219ENST00000584887 FDX1P10109 184 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 NMIQ13287 307 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-219ENST00000584887 SNX17Q15036 470 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 AGBL1Q96MI9 1066 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 RWDD1Q9H446 243 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-219ENST00000584887 ACAD9Q9H845 621 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 RNF146Q9NTX7 359 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-219ENST00000584887 ANAPC4Q9UJX5 808 aa24.17■■□□□ 1.46
TOP3A-219ENST00000584887 SYNRGQ9UMZ2 1314 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms