RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MAP3K7O43318 606 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 IGSF3O75054 1194 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L24Q0WX57 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 CATSPERGQ6ZRH7 1159 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 EHD4Q9H223 541 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 BTBD7Q9P203 1132 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 RABGAP1Q9Y3P9 1069 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 RLBP1P12271 317 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 GUCY1A2P33402 732 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 SHMT1P34896 483 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 CLCN1P35523 988 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 PLCD1P51178 756 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 USP14P54578 494 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 CCNA1P78396 465 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 ABCB5Q2M3G0 1257 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 CERKLQ49MI3 558 aaPredicted RBP9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 NPLOC4Q8TAT6 608 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNF775Q96BV0 537 aaPredicted RBP9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 EDC3Q96F86 508 aaKnown RBP9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 RPAP3Q9H6T3 665 aaPredicted RBP9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 EXOC6BQ9Y2D4 811 aa9.47□□□□□ -0.89
SMCHD1-210ENST00000583800 SMCHD1A6NHR9 2005 aa9.46□□□□□ -0.89
SMCHD1-210ENST00000583800 SLC15A5A6NIM6 579 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 GLRX3O76003 335 aaKnown RBP9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 CNGA1P29973 690 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 CYP2C19P33261 490 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 MAP3K12Q12852 859 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 GRB14Q14449 540 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 SEPT2Q15019 361 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 MFSD14CQ5VZR4 134 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 CEP85Q6P2H3 762 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 LBX2Q6XYB7 198 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 TTC6Q86TZ1 520 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 AACSQ86V21 672 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 CERS3Q8IU89 383 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 RIOK1Q9BRS2 568 aaKnown RBP9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 SENP6Q9GZR1 1112 aaPredicted RBP9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 MTMR10Q9NXD2 777 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
SMCHD1-210ENST00000583800 DNAH12Q6ZR08 3092 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 A0A1W2PRG0 241 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 ATP2B2Q01814 1243 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 TRPV1Q8NER1 839 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 LPAR1Q92633 364 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 IL1RAPL2Q9NP60 686 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 STXBP5LQ9Y2K9 1186 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 CUL9Q8IWT3 2517 aa9.45□□□□□ -0.9
SMCHD1-210ENST00000583800 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 MSCO60682 206 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 HOXC6P09630 235 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 CYBAP13498 195 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 PDE6AP16499 860 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 SSTR3P32745 418 aaPredicted RBP9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 PRSS12P56730 875 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 GABPAQ06546 454 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 ANO1Q5XXA6 986 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 SLC44A5Q8NCS7 719 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 SDR42E1Q8WUS8 393 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 MOV10L1Q9BXT6 1211 aaKnown RBP9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 MCM9Q9NXL9 1143 aa9.44□□□□□ -0.9
SMCHD1-210ENST00000583800 ZNF532Q9HCE3 1301 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 DNM1LO00429 736 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 IGHA2P01877 340 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 CYP2D6P10635 497 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 ADORA2AP29274 412 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 RTP1P59025 263 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 KIAA1755Q5JYT7 1200 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 GJC2Q5T442 439 aaPredicted RBP9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 SLC9C2Q5TAH2 1124 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 ERC1Q8IUD2 1116 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 CLEC10AQ8IUN9 316 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 LCORLQ8N3X6 602 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 FAM161BQ96MY7 647 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 GUCD1Q96NT3 240 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 DNAJC2Q99543 621 aaKnown RBP9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 CRNKL1Q9BZJ0 848 aaKnown RBP9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 TANGO6Q9C0B7 1094 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
SMCHD1-210ENST00000583800 GOLIM4O00461 696 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 COBLO75128 1261 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms