RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ADORA2AP29274 412 aa29.37■■■□□ 2.29
TSEN54-209ENST00000583454 IMMTQ16891 758 aaKnown RBP29.37■■■□□ 2.29
TSEN54-209ENST00000583454 MFSD6Q6ZSS7 791 aa29.37■■■□□ 2.29
TSEN54-209ENST00000583454 MB21D1Q8N884 522 aa29.37■■■□□ 2.29
TSEN54-209ENST00000583454 CEP95Q96GE4 821 aa29.37■■■□□ 2.29
TSEN54-209ENST00000583454 RNF41Q9H4P4 317 aaPredicted RBP29.37■■■□□ 2.29
TSEN54-209ENST00000583454 PLXNA1Q9UIW2 1896 aa29.37■■■□□ 2.29
TSEN54-209ENST00000583454 MYH4Q9Y623 1939 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 SOX1O00570 391 aaPredicted RBP29.36■■■□□ 2.29
TSEN54-209ENST00000583454 STRNO43815 780 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 RANBP6O60518 1105 aaKnown RBP29.36■■■□□ 2.29
TSEN54-209ENST00000583454 CDC45O75419 566 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 FLOT1O75955 427 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 BMP8BP34820 402 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 ATP2B2Q01814 1243 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 MAP4K1Q92918 833 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 ADAMTS5Q9UNA0 930 aa29.36■■■□□ 2.29
TSEN54-209ENST00000583454 TSPY2A6NKD2 308 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 COBLO75128 1261 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 CYBAP13498 195 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 SYN1P17600 705 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 LRRC26Q2I0M4 334 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 OLFML2BQ68BL8 750 aa29.35■■■□□ 2.29
TSEN54-209ENST00000583454 DDX20Q9UHI6 824 aaKnown RBP29.35■■■□□ 2.29
TSEN54-209ENST00000583454 U3KPZ7 1027 aaPredicted RBP29.35■■■□□ 2.29
TSEN54-209ENST00000583454 TTLL1O95922 423 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 TMEM132BQ14DG7 1078 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 IL17RBQ9NRM6 502 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 FBXO28Q9NVF7 368 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 CLIP2Q9UDT6 1046 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 SYNPO2Q9UMS6 1093 aa29.34■■■□□ 2.29
TSEN54-209ENST00000583454 NOVP48745 357 aa29.33■■■□□ 2.29
TSEN54-209ENST00000583454 NT5C2P49902 561 aa29.33■■■□□ 2.29
TSEN54-209ENST00000583454 LSG1Q9H089 658 aaKnown RBP29.33■■■□□ 2.29
TSEN54-209ENST00000583454 MROH8Q9H579 483 aa29.33■■■□□ 2.29
TSEN54-209ENST00000583454 TOMM22Q9NS69 142 aa29.33■■■□□ 2.29
TSEN54-209ENST00000583454 RRP12Q5JTH9 1297 aaKnown RBP29.32■■■□□ 2.28
TSEN54-209ENST00000583454 PPP4R3BQ5MIZ7 849 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 KIAA1211Q6ZU35 1233 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 DPP9Q86TI2 863 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 GOPCQ9HD26 462 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 TCP11L1Q9NUJ3 509 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 SMCHD1A6NHR9 2005 aa29.32■■■□□ 2.28
TSEN54-209ENST00000583454 NEDD4P46934 1319 aa29.31■■■□□ 2.28
TSEN54-209ENST00000583454 MAGEA10P43363 369 aaPredicted RBP29.31■■■□□ 2.28
TSEN54-209ENST00000583454 CASC1Q6TDU7 716 aa29.31■■■□□ 2.28
TSEN54-209ENST00000583454 ABRAQ8N0Z2 381 aa29.31■■■□□ 2.28
TSEN54-209ENST00000583454 NMT2O60551 498 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 MSCO60682 206 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 PLS1Q14651 629 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 NCAPG2Q86XI2 1143 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 REPS2Q8NFH8 660 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 LRCH3Q96II8 777 aa29.3■■■□□ 2.28
TSEN54-209ENST00000583454 F5H6K3 240 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 CYP21A2P08686 494 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 CNGA1P29973 690 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 KLRC3Q07444 240 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 ESR2Q92731 530 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 PPP1R9AQ9ULJ8 1098 aa29.29■■■□□ 2.28
TSEN54-209ENST00000583454 ZNF214Q9UL59 606 aaPredicted RBP29.28■■■□□ 2.28
TSEN54-209ENST00000583454 RBM8AQ9Y5S9 174 aaKnown RBP29.28■■■□□ 2.28
TSEN54-209ENST00000583454 LTBP2Q14767 1821 aa29.28■■■□□ 2.28
TSEN54-209ENST00000583454 VWA5AO00534 786 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 NDUFB10O96000 172 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 FAM83BQ5T0W9 1011 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 SAMD1Q6SPF0 538 aaPredicted RBP29.27■■■□□ 2.28
TSEN54-209ENST00000583454 GMCL1P1Q8NEA9 526 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 MAML3Q96JK9 1138 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 CNNM2Q9H8M5 875 aa29.27■■■□□ 2.28
TSEN54-209ENST00000583454 DNM1LO00429 736 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 SLC25A27O95847 323 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 RIOX2Q8IUF8 465 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 KRT23Q9C075 422 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 SENP6Q9GZR1 1112 aaPredicted RBP29.26■■■□□ 2.27
TSEN54-209ENST00000583454 ANO2Q9NQ90 1003 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 STX8Q9UNK0 236 aa29.26■■■□□ 2.27
TSEN54-209ENST00000583454 KDM4AO75164 1064 aa29.25■■■□□ 2.27
TSEN54-209ENST00000583454 LRRC47Q8N1G4 583 aaKnown RBP29.25■■■□□ 2.27
TSEN54-209ENST00000583454 NUP88Q99567 741 aaPredicted RBP29.25■■■□□ 2.27
TSEN54-209ENST00000583454 B4E1Z4 1266 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 SEPT4O43236 478 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 FCER1AP12319 257 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 PRAMEF19Q5SWL8 479 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 TTC14Q96N46 770 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 ZSWIM5Q9P217 1185 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 TAF6LQ9Y6J9 622 aa29.24■■■□□ 2.27
TSEN54-209ENST00000583454 ANO1Q5XXA6 986 aa29.23■■■□□ 2.27
TSEN54-209ENST00000583454 RCSD1Q6JBY9 416 aa29.23■■■□□ 2.27
TSEN54-209ENST00000583454 RAD21O60216 631 aa29.22■■■□□ 2.27
TSEN54-209ENST00000583454 TOP1P11387 765 aaKnown RBP29.22■■■□□ 2.27
TSEN54-209ENST00000583454 STAT3P40763 770 aa29.22■■■□□ 2.27
TSEN54-209ENST00000583454 NECTIN1Q15223 517 aa29.22■■■□□ 2.27
TSEN54-209ENST00000583454 GJC2Q5T442 439 aaPredicted RBP29.22■■■□□ 2.27
TSEN54-209ENST00000583454 SLFN13Q68D06 897 aa29.22■■■□□ 2.27
TSEN54-209ENST00000583454 SLC5A4Q9NY91 659 aa29.22■■■□□ 2.27
TSEN54-209ENST00000583454 E7EWF7 191 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 PGK2P07205 417 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 ZNF792Q3KQV3 632 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 LRIT3Q3SXY7 679 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 CCDC178Q5BJE1 867 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms