RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-208	ENST00000580237	TACC3	Q9Y6A5	838 aa		12.84	□□□□□ -0.35
NDEL1-208	ENST00000580237	MCM3AP	O60318	1980 aa		12.83	□□□□□ -0.35
NDEL1-208	ENST00000580237		B4E1Z4	1266 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	STRN	O43815	780 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	KDM4A	O75164	1064 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	TOP1	P11387	765 aa	Known RBP	12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	NT5C2	P49902	561 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	CCL14	Q16627	93 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	KIAA1211	Q6ZU35	1233 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	KCTD1	Q719H9	257 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	FAM160B2	Q86V87	743 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	RIOX2	Q8IUF8	465 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	U2AF1L4	Q8WU68	220 aa	Known RBP	12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	CHURC1	Q8WUH1	139 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	MMP19	Q99542	508 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	UBAC1	Q9BSL1	405 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	KRT23	Q9C075	422 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	CNNM2	Q9H8M5	875 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	ZNF214	Q9UL59	606 aa	Predicted RBP	12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	RPTOR	Q8N122	1335 aa		12.83	□□□□□ -0.36
NDEL1-208	ENST00000580237	GJA8	P48165	433 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	TRIM32	Q13049	653 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	TRDN	Q13061	729 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	CCDC178	Q5BJE1	867 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	CASC1	Q6TDU7	716 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	RASGRP2	Q7LDG7	609 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	SKAP1	Q86WV1	359 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	DCAF4	Q8WV16	495 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	USP6NL	Q92738	828 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	SHISA4	Q96DD7	197 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	ZKSCAN3	Q9BRR0	538 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	RAVER2	Q9HCJ3	691 aa	Known RBP	12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	TCP11L1	Q9NUJ3	509 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	ADAMTS5	Q9UNA0	930 aa		12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237		U3KPZ7	1027 aa	Predicted RBP	12.82	□□□□□ -0.36
NDEL1-208	ENST00000580237	SGSM2	O43147	1006 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	FARP2	O94887	1054 aa	Predicted RBP	12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	TFRC	P02786	760 aa	Known RBP	12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	FDX1	P10109	184 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	BMP2KL	Q5H9B9	411 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	RALYL	Q86SE5	291 aa	Known RBP	12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	ABRA	Q8N0Z2	381 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	TMEM47	Q9BQJ4	181 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	KAT14	Q9H8E8	782 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	PAK6	Q9NQU5	681 aa	Predicted RBP	12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	HOMER2	Q9NSB8	354 aa		12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.81	□□□□□ -0.36
NDEL1-208	ENST00000580237	SMCHD1	A6NHR9	2005 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	HOXC6	P09630	235 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	CNGA1	P29973	690 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	OAZ1	P54368	228 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	RCSD1	Q6JBY9	416 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	CCDC174	Q6PII3	467 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	REPS2	Q8NFH8	660 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	NPLOC4	Q8TAT6	608 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	DDX11	Q96FC9	970 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	TTC14	Q96N46	770 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	SLC38A10	Q9HBR0	1119 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	GPCPD1	Q9NPB8	672 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	TNKS	O95271	1327 aa		12.8	□□□□□ -0.36
NDEL1-208	ENST00000580237	PGK2	P07205	417 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	CYP2C19	P33261	490 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	PTH1R	Q03431	593 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	CACNB2	Q08289	660 aa	Predicted RBP	12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	MAP3K21	Q5TCX8	1036 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	ANO2	Q9NQ90	1003 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	FLRT1	Q9NZU1	646 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	FBXO40	Q9UH90	709 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	PRR12	Q9ULL5	1215 aa		12.79	□□□□□ -0.36
NDEL1-208	ENST00000580237	ERICH2	A1L162	156 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	ATP2A1	O14983	1001 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	COBL	O75128	1261 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	CDC45	O75419	566 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	CYP21A2	P08686	494 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	PDHB	P11177	359 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	CAPN2	P17655	700 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	CCND3	P30281	292 aa	Predicted RBP	12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	SLC16A2	P36021	539 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	NOV	P48745	357 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	SART3	Q15020	963 aa	Known RBP	12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	IFIT1B	Q5T764	474 aa	Known RBP	12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	SYDE2	Q5VT97	1194 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	OLFML2B	Q68BL8	750 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	DGKH	Q86XP1	1220 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	ANKRD35	Q8N283	1001 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	PNMA1	Q8ND90	353 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	MAML3	Q96JK9	1138 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	ESYT1	Q9BSJ8	1104 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	HTATIP2	Q9BUP3	242 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	ACAD9	Q9H845	621 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	RNF146	Q9NTX7	359 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	CCPG1	Q9ULG6	757 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	RBM8A	Q9Y5S9	174 aa	Known RBP	12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	ALPK3	Q96L96	1907 aa		12.78	□□□□□ -0.36
NDEL1-208	ENST00000580237	DHX16	O60231	1041 aa	Known RBP	12.77	□□□□□ -0.37
NDEL1-208	ENST00000580237	MSC	O60682	206 aa		12.77	□□□□□ -0.37
NDEL1-208	ENST00000580237	PLA2G6	O60733	806 aa		12.77	□□□□□ -0.37
NDEL1-208	ENST00000580237	ALAS1	P13196	640 aa		12.77	□□□□□ -0.37

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