RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 API5Q9BZZ5 524 aaKnown RBP13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 VCPKMTQ9H867 229 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 RIPK3Q9Y572 518 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 ASTN1O14525 1302 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 FLOT1O75955 427 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 GNAI3P08754 354 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 CYP2D6P10635 497 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 GJA9P57773 515 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 KRT40Q6A162 431 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 SPICE1Q8N0Z3 855 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 MIER1Q8N108 512 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
SUPT4H1-203ENST00000579289 VWA5AO00534 786 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 AKR1B1P15121 316 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 USP5P45974 858 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 PLS1Q14651 629 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 TMEM31Q5JXX7 168 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
SUPT4H1-203ENST00000579289 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 WDR46O15213 610 aaKnown RBP13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 LPXNO60711 386 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 FGBP02675 491 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 STAT3P40763 770 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 RARSP54136 660 aaKnown RBP13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 FAM184BQ9ULE4 1060 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 GREB1LQ9C091 1923 aaPredicted RBP13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
SUPT4H1-203ENST00000579289 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 PTGS1P23219 599 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 ACVR2BQ13705 512 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 OTOP2Q7RTS6 562 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 CERS3Q8IU89 383 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 GLT1D1Q96MS3 346 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 NOC4LQ9BVI4 516 aaKnown RBP13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 PPP1R9AQ9ULJ8 1098 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 MCM3APO60318 1980 aa13.59□□□□□ -0.23
SUPT4H1-203ENST00000579289 TRIOO75962 3097 aa13.58□□□□□ -0.23
SUPT4H1-203ENST00000579289 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
SUPT4H1-203ENST00000579289 GNAI2P04899 355 aa13.58□□□□□ -0.24
SUPT4H1-203ENST00000579289 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
SUPT4H1-203ENST00000579289 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
SUPT4H1-203ENST00000579289 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
SUPT4H1-203ENST00000579289 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 TRIM27P14373 513 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 KCTD2Q14681 263 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 TMED8Q6PL24 325 aaPredicted RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 PCSK9Q8NBP7 692 aaKnown RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 SDR42E1Q8WUS8 393 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
SUPT4H1-203ENST00000579289 PTPRSQ13332 1948 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 ATP2A1O14983 1001 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 C6orf222P0C671 652 aaPredicted RBP13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 EEF2P13639 858 aaKnown RBP13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 CCL23P55773 120 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 BEX3Q00994 111 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 ICA1Q05084 483 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 AAK1Q2M2I8 961 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 LCORLQ8N3X6 602 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 COG5Q9UP83 839 aa13.56□□□□□ -0.24
SUPT4H1-203ENST00000579289 B4GALT4O60513 344 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
SUPT4H1-203ENST00000579289 TAP1Q03518 808 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms