RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IGHA2P01877 340 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RARBP10826 455 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 BMP3P12645 472 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RTP1P59025 263 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FERMT2Q96AC1 680 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 EVI5LQ96CN4 794 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 XPNPEP3Q9NQH7 507 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PRDM5Q9NQX1 630 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FEM1BQ9UK73 627 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CNPY2Q9Y2B0 182 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TRIOBPQ9H2D6 2365 aa10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SALL3Q9BXA9 1300 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TMEM232C9JQI7 657 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PDE1AP54750 535 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LRRC41Q15345 812 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 VPS53Q5VIR6 699 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ANKRD35Q8N283 1001 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MKL1Q969V6 931 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LNPKQ9C0E8 428 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 INCENPQ9NQS7 918 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ZHX1Q9UKY1 873 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 DIS3Q9Y2L1 958 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PLIN4Q96Q06 1357 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RANBP6O60518 1105 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PGK1P00558 417 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 AKR1A1P14550 325 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SLC1A4P43007 532 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 STAT2P52630 851 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RRP12Q5JTH9 1297 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RNF180Q86T96 592 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RILPL2Q969X0 211 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FAM227BQ96M60 508 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
CDK5RAP3-211ENST00000578996 A0A0D9SFI3 127 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FOXP2O15409 715 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 NMT2O60551 498 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MCCP23508 829 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 KCTD1Q719H9 257 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 HELLSQ9NRZ9 838 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FBXO40Q9UH90 709 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SYNGAP1Q96PV0 1343 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 ATP2A1O14983 1001 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 SNAP25P60880 206 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 LRIT3Q3SXY7 679 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CCDC174Q6PII3 467 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 Q7L0L9 218 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FAM160B2Q86V87 743 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CHST13Q8NET6 341 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CHURC1Q8WUH1 139 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RWDD1Q9H446 243 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 FAM184BQ9ULE4 1060 aa10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PLXNA1Q9UIW2 1896 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SYNRGQ9UMZ2 1314 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DNAJC25-GNG10A0A024R161 153 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 SNAI1O95863 264 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ALAS1P13196 640 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 OAZ1P54368 228 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 HAND2P61296 217 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ACVR2BQ13705 512 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ZNF589Q86UQ0 364 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 DEFB123Q8N688 67 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 STAG1Q8WVM7 1258 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 AGBL1Q96MI9 1066 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
CDK5RAP3-211ENST00000578996 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms