RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
MKS1-207ENST00000578789 TNKSO95271 1327 aa17■□□□□ 0.31
MKS1-207ENST00000578789 STRNO43815 780 aa17■□□□□ 0.31
MKS1-207ENST00000578789 HMGCRP04035 888 aa17■□□□□ 0.31
MKS1-207ENST00000578789 INHAP05111 366 aa17■□□□□ 0.31
MKS1-207ENST00000578789 HOXC6P09630 235 aa17■□□□□ 0.31
MKS1-207ENST00000578789 SNHG28P0DPA3 235 aa17■□□□□ 0.31
MKS1-207ENST00000578789 CYP2B6P20813 491 aa17■□□□□ 0.31
MKS1-207ENST00000578789 STAT3P40763 770 aa17■□□□□ 0.31
MKS1-207ENST00000578789 OAZ1P54368 228 aa17■□□□□ 0.31
MKS1-207ENST00000578789 WDR78Q5VTH9 848 aa17■□□□□ 0.31
MKS1-207ENST00000578789 CASC1Q6TDU7 716 aa17■□□□□ 0.31
MKS1-207ENST00000578789 STOX1Q6ZVD7 989 aa17■□□□□ 0.31
MKS1-207ENST00000578789 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
MKS1-207ENST00000578789 ABRAQ8N0Z2 381 aa17■□□□□ 0.31
MKS1-207ENST00000578789 CHURC1Q8WUH1 139 aa17■□□□□ 0.31
MKS1-207ENST00000578789 TRIB2Q92519 343 aa17■□□□□ 0.31
MKS1-207ENST00000578789 KIFC2Q96AC6 838 aa17■□□□□ 0.31
MKS1-207ENST00000578789 TEX13BQ9BXU2 312 aa17■□□□□ 0.31
MKS1-207ENST00000578789 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
MKS1-207ENST00000578789 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 E7EWF7 191 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 ZBED4O75132 1171 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 PDHBP11177 359 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 TRDNQ13061 729 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 MTFR1Q15390 333 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 KCTD1Q719H9 257 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 ENAHQ8N8S7 591 aaPredicted RBP16.99■□□□□ 0.31
MKS1-207ENST00000578789 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
MKS1-207ENST00000578789 ZNFX1Q9P2E3 1918 aaKnown RBP16.99■□□□□ 0.31
MKS1-207ENST00000578789 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
MKS1-207ENST00000578789 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
MKS1-207ENST00000578789 SEC23AQ15436 765 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
MKS1-207ENST00000578789 CYB5R4Q7L1T6 521 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.98■□□□□ 0.31
MKS1-207ENST00000578789 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 UBAC1Q9BSL1 405 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 TMEM106CQ9BVX2 250 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
MKS1-207ENST00000578789 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
MKS1-207ENST00000578789 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
MKS1-207ENST00000578789 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 CCL5P13501 91 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 ADORA2AP29274 412 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 NECTIN1Q15223 517 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 RALYLQ86SE5 291 aaKnown RBP16.97■□□□□ 0.31
MKS1-207ENST00000578789 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
MKS1-207ENST00000578789 SLC27A2O14975 620 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 MYCP01106 439 aaPredicted RBP16.96■□□□□ 0.31
MKS1-207ENST00000578789 IGHA2P01877 340 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 FCER1AP12319 257 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
MKS1-207ENST00000578789 CCL14Q16627 93 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 MAP3K21Q5TCX8 1036 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 MB21D2Q8IYB1 491 aaPredicted RBP16.96■□□□□ 0.31
MKS1-207ENST00000578789 NPLOC4Q8TAT6 608 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 RAVER2Q9HCJ3 691 aaKnown RBP16.96■□□□□ 0.31
MKS1-207ENST00000578789 RIPK3Q9Y572 518 aa16.96■□□□□ 0.31
MKS1-207ENST00000578789 CTDP1Q9Y5B0 961 aaPredicted RBP16.96■□□□□ 0.31
MKS1-207ENST00000578789 ZNF536O15090 1300 aa16.96■□□□□ 0.3
MKS1-207ENST00000578789 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.3
MKS1-207ENST00000578789 GJB1P08034 283 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 TRIM32Q13049 653 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 GPATCH4Q5T3I0 446 aaKnown RBP16.95■□□□□ 0.3
MKS1-207ENST00000578789 IFIT1BQ5T764 474 aaKnown RBP16.95■□□□□ 0.3
MKS1-207ENST00000578789 SYDE2Q5VT97 1194 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 TTBK2Q6IQ55 1244 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 CPXCR1Q8N123 301 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 MMP19Q99542 508 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 RNF208Q9H0X6 261 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
MKS1-207ENST00000578789 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
MKS1-207ENST00000578789 FLRT1Q9NZU1 646 aa16.95■□□□□ 0.3
MKS1-207ENST00000578789 CENPFP49454 3210 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 COBLO75128 1261 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 ANTXR2P58335 489 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 OLFML2BQ68BL8 750 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 DPP9Q86TI2 863 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 CHST13Q8NET6 341 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 SHISA4Q96DD7 197 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 MTA3Q9BTC8 594 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 GPCPD1Q9NPB8 672 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 SLC5A4Q9NY91 659 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 FBXO40Q9UH90 709 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
MKS1-207ENST00000578789 FRMPD3Q5JV73 1810 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 PRKAR2AP13861 404 aaKnown RBP16.93■□□□□ 0.3
MKS1-207ENST00000578789 EN2P19622 333 aaPredicted RBP16.93■□□□□ 0.3
MKS1-207ENST00000578789 SLC16A2P36021 539 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms