RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 AMPD3Q01432 767 aa18.68■□□□□ 0.58
DDX42-208ENST00000578681 CUL4BQ13620 913 aa18.68■□□□□ 0.58
DDX42-208ENST00000578681 KRT79Q5XKE5 535 aa18.68■□□□□ 0.58
DDX42-208ENST00000578681 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
DDX42-208ENST00000578681 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
DDX42-208ENST00000578681 IMPACTQ9P2X3 320 aa18.68■□□□□ 0.58
DDX42-208ENST00000578681 CLRN2A0PK11 232 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 KIF2AO00139 706 aaPredicted RBP18.67■□□□□ 0.58
DDX42-208ENST00000578681 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 ADCY7P51828 1080 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 UBE2SQ16763 222 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 SPECC1LQ69YQ0 1117 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 ZNF384Q8TF68 577 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
DDX42-208ENST00000578681 KIAA1328Q86T90 577 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 ANAPC4Q9UJX5 808 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 DNA2P51530 1060 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.585e-6■■■□□ 15.4
DDX42-208ENST00000578681 PKN1Q16512 942 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 SARM1Q6SZW1 724 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 KRT25Q7Z3Z0 450 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 FOXP4Q8IVH2 680 aaPredicted RBP18.67■□□□□ 0.58
DDX42-208ENST00000578681 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
DDX42-208ENST00000578681 TMEM260Q9NX78 707 aa18.67■□□□□ 0.58
DDX42-208ENST00000578681 TCP10L2B9ZVM9 353 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 AKR1B15C9JRZ8 316 aaPredicted RBP18.66■□□□□ 0.58
DDX42-208ENST00000578681 CHRNA5P30532 468 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 IKBKBO14920 756 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 AKR1B1P15121 316 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 CALCRLQ16602 461 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
DDX42-208ENST00000578681 CNTNAP5Q8WYK1 1306 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 SNX29Q8TEQ0 813 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
DDX42-208ENST00000578681 KIF5CO60282 957 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 ADRA2BP18089 450 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 RASA1P20936 1047 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 SRRTQ9BXP5 876 aaKnown RBP18.65■□□□□ 0.58
DDX42-208ENST00000578681 TSPYL1Q9H0U9 437 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 DAGLAQ9Y4D2 1042 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 FLT1P17948 1338 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 RPN1P04843 607 aaKnown RBP18.65■□□□□ 0.58
DDX42-208ENST00000578681 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.584e-8■■□□□ 12.1
DDX42-208ENST00000578681 MRPL12P52815 198 aaKnown RBP18.65■□□□□ 0.58
DDX42-208ENST00000578681 CSGALNACT2Q8N6G5 542 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 MTA3Q9BTC8 594 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 SPATA31A6Q5VVP1 1343 aa18.65■□□□□ 0.58
DDX42-208ENST00000578681 ABCC6O95255 1503 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 OR52Z1P0C646 297 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 ZNF215Q9UL58 517 aaPredicted RBP18.64■□□□□ 0.57
DDX42-208ENST00000578681 RAD17O75943 681 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 CDC25BP30305 580 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 CERKLQ49MI3 558 aaPredicted RBP18.64■□□□□ 0.57
DDX42-208ENST00000578681 FKBP15Q5T1M5 1219 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 ARGLU1Q9NWB6 273 aaPredicted RBP18.64■□□□□ 0.57
DDX42-208ENST00000578681 PKD2L1Q9P0L9 805 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 MMRN2Q9H8L6 949 aa18.64■□□□□ 0.57
DDX42-208ENST00000578681 LZTS2Q9BRK4 669 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 SLC39A2Q9NP94 309 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 SLU7O95391 586 aaKnown RBP18.63■□□□□ 0.57
DDX42-208ENST00000578681 CCDC40Q4G0X9 1142 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 SBK1Q52WX2 424 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 ARMCX5Q6P1M9 558 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 SV2BQ7L1I2 683 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 DDR1Q08345 913 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 COA1Q9GZY4 146 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 WNT7AO00755 349 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
DDX42-208ENST00000578681 CACNA2D4Q7Z3S7 1137 aa18.63■□□□□ 0.57
DDX42-208ENST00000578681 BCCIPQ9P287 314 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDX42-208ENST00000578681 SPDYE3A6NKU9 549 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 TEX33O43247 280 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 KRT9P35527 623 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 SPAG1Q07617 926 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 MORC3Q14149 939 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 ELF2Q15723 593 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 CUL5Q93034 780 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 C21orf2O43822 256 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 CCDC175P0C221 793 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 NPR1P16066 1061 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
DDX42-208ENST00000578681 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 FAM170AA1A519 330 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
DDX42-208ENST00000578681 GRM4Q14833 912 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 TCERG1LQ5VWI1 586 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 GSDMAQ96QA5 445 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 SCAF8Q9UPN6 1271 aaKnown RBP18.62■□□□□ 0.57
DDX42-208ENST00000578681 HPSEQ9Y251 543 aa18.62■□□□□ 0.57
DDX42-208ENST00000578681 CHMP2AO43633 222 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms