RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 CSRNP1Q96S65 589 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 RRP36Q96EU6 259 aaKnown RBP11.8□□□□□ -0.52
SMURF2-203ENST00000578386 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 SEC63Q9UGP8 760 aaKnown RBP11.8□□□□□ -0.52
SMURF2-203ENST00000578386 SIPA1L1O43166 1804 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 COBLO75128 1261 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 PI4KBQ9UBF8 816 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 SERPINA10Q9UK55 444 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 PSME4Q14997 1843 aa11.8□□□□□ -0.52
SMURF2-203ENST00000578386 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 EGFRP00533 1210 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 BMP6P22004 513 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
SMURF2-203ENST00000578386 CEP57L1Q8IYX8 460 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 BCS1LQ9Y276 419 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
SMURF2-203ENST00000578386 GH2P01242 217 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
SMURF2-203ENST00000578386 UBE2SQ16763 222 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 GJA10Q969M2 543 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 BLZF1Q9H2G9 400 aa11.79□□□□□ -0.52
SMURF2-203ENST00000578386 PTGS1P23219 599 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
SMURF2-203ENST00000578386 NBPF9Q3BBW0 867 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 SMYD4Q8IYR2 804 aaPredicted RBP11.78□□□□□ -0.52
SMURF2-203ENST00000578386 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 SWAP70Q9UH65 585 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 CALML3P27482 149 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 CXCL9Q07325 125 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 DLGAP5Q15398 846 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
SMURF2-203ENST00000578386 M0R2N6 131 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 ATP1A3P13637 1013 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 ZNF75DP51815 510 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 NLRP12P59046 1061 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.52
SMURF2-203ENST00000578386 ZNF543Q08ER8 600 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 LRMPQ12912 555 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 POSTNQ15063 836 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.52
SMURF2-203ENST00000578386 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 OGFOD1Q8N543 542 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.52
SMURF2-203ENST00000578386 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 ECE1P42892 770 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 ICA1Q05084 483 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 RASSF7Q02833 373 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 NIM1KQ8IY84 436 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 KCNF1Q9H3M0 494 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
SMURF2-203ENST00000578386 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
SMURF2-203ENST00000578386 GREB1LQ9C091 1923 aaPredicted RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 FAM237AA0A1B0GTK4 181 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 SLC1A4P43007 532 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 NOVP48745 357 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 MAN1B1Q9UKM7 699 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 FILIP1Q7Z7B0 1213 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 C4orf32Q8N8J7 132 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 TIGD1Q96MW7 591 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 TUBE1Q9UJT0 475 aa11.76□□□□□ -0.53
SMURF2-203ENST00000578386 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
SMURF2-203ENST00000578386 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
SMURF2-203ENST00000578386 CLCN1P35523 988 aa11.75□□□□□ -0.53
SMURF2-203ENST00000578386 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
SMURF2-203ENST00000578386 USH1GQ495M9 461 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms