RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 TEX13BQ9BXU2 312 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 SYNPO2Q9UMS6 1093 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 DIS3Q9Y2L1 958 aaKnown RBP17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 PLIN4Q96Q06 1357 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 TINF2Q9BSI4 451 aa17.75■□□□□ 0.43
RN7SL560P-201ENST00000577943 UBE2OQ9C0C9 1292 aaKnown RBP17.75■□□□□ 0.43
RN7SL560P-201ENST00000577943 NRBP1Q9UHY1 535 aa17.75■□□□□ 0.43
RN7SL560P-201ENST00000577943 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
RN7SL560P-201ENST00000577943 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 PDE1AP54750 535 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 SLFN13Q68D06 897 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 GMCL1P1Q8NEA9 526 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 LRCH3Q96II8 777 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 RIPK3Q9Y572 518 aa17.74■□□□□ 0.43
RN7SL560P-201ENST00000577943 TSPY2A6NKD2 308 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 BMP3P12645 472 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 RTP1P59025 263 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 LRRC41Q15345 812 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 TDHQ8IZJ6 230 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
RN7SL560P-201ENST00000577943 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 FOXP2O15409 715 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 RARBP10826 455 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 LBHD1Q9BQE6 289 aaPredicted RBP17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
RN7SL560P-201ENST00000577943 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 TAL1P17542 331 aaPredicted RBP17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 ADCYAP1R1P41586 468 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 SLC1A4P43007 532 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 STAT2P52630 851 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 AAMPQ13685 434 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 CHMP4CQ96CF2 233 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 XPNPEP3Q9NQH7 507 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 INCENPQ9NQS7 918 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 FBXO40Q9UH90 709 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 STX8Q9UNK0 236 aa17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
RN7SL560P-201ENST00000577943 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 ZNF865P0CJ78 1059 aaPredicted RBP17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 FDX1P10109 184 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 AKR1A1P14550 325 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 OAZ1P54368 228 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 ANKRD35Q8N283 1001 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
RN7SL560P-201ENST00000577943 DNAJC25-GNG10A0A024R161 153 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 NMT2O60551 498 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 PGK1P00558 417 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 MCCP23508 829 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 LRIT3Q3SXY7 679 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 MCMDC2Q4G0Z9 681 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 RNF180Q86T96 592 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 FAM160B2Q86V87 743 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 CHST13Q8NET6 341 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 TOMM22Q9NS69 142 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 SYNGAP1Q96PV0 1343 aa17.69■□□□□ 0.42
RN7SL560P-201ENST00000577943 A0A0D9SFI3 127 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 ALX1Q15699 326 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 IL17RBQ9NRM6 502 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 ZHX1Q9UKY1 873 aaPredicted RBP17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 MTMR7Q9Y216 660 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
RN7SL560P-201ENST00000577943 ORC4O43929 436 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 SNAI1O95863 264 aaPredicted RBP17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 FGAP02671 866 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 ZNF467Q7Z7K2 595 aaPredicted RBP17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 TICAM2Q86XR7 235 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 LENG1Q96BZ8 264 aaPredicted RBP17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 ACAD9Q9H845 621 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 PRDM5Q9NQX1 630 aaPredicted RBP17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 FAM184BQ9ULE4 1060 aa17.67■□□□□ 0.42
RN7SL560P-201ENST00000577943 PHF24Q9UPV7 400 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms