RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
USP43-203ENST00000570827 UTYO14607 1347 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 CCDC40Q4G0X9 1142 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
USP43-203ENST00000570827 RRAGAQ7L523 313 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 STRBPQ96SI9 672 aaKnown RBP11.12□□□□□ -0.63
USP43-203ENST00000570827 PLCD4Q9BRC7 762 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 AGXT2Q9BYV1 514 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 HAUS4Q9H6D7 363 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 MOCS3O95396 460 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TUBBP07437 444 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 MAGEA1P43355 309 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
USP43-203ENST00000570827 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 JPH2Q9BR39 696 aaPredicted RBP11.11□□□□□ -0.63
USP43-203ENST00000570827 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
USP43-203ENST00000570827 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 FRMD3A2A2Y4 597 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TULP2O00295 520 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
USP43-203ENST00000570827 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 BACH1O14867 736 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 KCNQ2O43526 872 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 NCK2O43639 380 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TCP11X2Q5H9J9 407 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 GPR108Q9NPR9 543 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 AATFQ9NY61 560 aaKnown RBP eCLIP11.11□□□□□ -0.63
USP43-203ENST00000570827 PALLDQ8WX93 1383 aa11.11□□□□□ -0.63
USP43-203ENST00000570827 E7EVH7 732 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 MAP2K2P36507 400 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 PRCPP42785 496 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 DYNLL1P63167 89 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 SOGA3Q5TF21 947 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 TBC1D7Q9P0N9 293 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 G3V3G9 751 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 KLK7P49862 253 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 TUBB4BP68371 445 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 GUCY2DQ02846 1103 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 FERMT2Q96AC1 680 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 CCDC43Q96MW1 224 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 TUBGCP2Q9BSJ2 902 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 SLC39A2Q9NP94 309 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 AGPAT5Q9NUQ2 364 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 USP17L21D6R901 530 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 NMT2O60551 498 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 PDE8BO95263 885 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 USP14P54578 494 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 IFT88Q13099 833 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
USP43-203ENST00000570827 INF2Q27J81 1249 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 CCDC91Q7Z6B0 441 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 HPS3Q969F9 1004 aa11.1□□□□□ -0.63
USP43-203ENST00000570827 A0A087WUV0 522 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 BMP15O95972 392 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 A0A087X0B3 334 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 RASSF7Q02833 373 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 RASGRF1Q13972 1273 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 TRIM14Q14142 442 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 NGLY1Q96IV0 654 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
USP43-203ENST00000570827 ZNF18P17022 549 aa11.09□□□□□ -0.63
USP43-203ENST00000570827 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms