RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 MAOBP27338 520 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 IL13P35225 146 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 ERMP1Q7Z2K6 904 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
GDE1-204ENST00000569773 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 ZC3H12CQ9C0D7 883 aaKnown RBP7.55□□□□□ -1.2
GDE1-204ENST00000569773 SAMM50Q9Y512 469 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 KCPQ6ZWJ8 1503 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 LOC100289279A0A1B0GTE1 492 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
GDE1-204ENST00000569773 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
GDE1-204ENST00000569773 ARNTP27540 789 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 AMOTQ4VCS5 1084 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 PLEKHO1Q53GL0 409 aaPredicted RBP7.54□□□□□ -1.2
GDE1-204ENST00000569773 ZNF530Q6P9A1 599 aaPredicted RBP7.54□□□□□ -1.2
GDE1-204ENST00000569773 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 POLR3GLQ9BT43 218 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 KBTBD4Q9NVX7 518 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 TLR6Q9Y2C9 796 aa7.54□□□□□ -1.2
GDE1-204ENST00000569773 KIF7Q2M1P5 1343 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 ANKRD31Q8N7Z5 1873 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 RPS6KA4O75676 772 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 DLGAP3O95886 979 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 HSP90AB1P08238 724 aaKnown RBP7.53□□□□□ -1.2
GDE1-204ENST00000569773 MMP10P09238 476 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 RLBP1P12271 317 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 GYS1P13807 737 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 SELPP16109 830 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 ZNF394Q53GI3 561 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 MORC1Q86VD1 984 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 RELL1Q8IUW5 271 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 KCNB2Q92953 911 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 RSRP1Q9BUV0 290 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 PCDHGB7Q9Y5F8 929 aa7.53□□□□□ -1.2
GDE1-204ENST00000569773 MINDY4BA8MYZ0 360 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 KCNA3P22001 575 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
GDE1-204ENST00000569773 ZNF252P-AS1Q0IIN9 211 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 MAP1SQ66K74 1059 aaPredicted RBP7.52□□□□□ -1.21
GDE1-204ENST00000569773 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 LLGL2Q6P1M3 1020 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 AGMOQ6ZNB7 445 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 ACAD11Q709F0 780 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
GDE1-204ENST00000569773 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
GDE1-204ENST00000569773 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
GDE1-204ENST00000569773 DICER1Q9UPY3 1922 aaKnown RBP7.52□□□□□ -1.21
GDE1-204ENST00000569773 SCN7AQ01118 1682 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
GDE1-204ENST00000569773 CRKLP46109 303 aaKnown RBP7.51□□□□□ -1.21
GDE1-204ENST00000569773 MTHFSP49914 203 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 RPS26P62854 115 aaKnown RBP7.51□□□□□ -1.21
GDE1-204ENST00000569773 PWP1Q13610 501 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 LRRC14Q15048 493 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
GDE1-204ENST00000569773 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 AGGF1Q8N302 714 aaeCLIP7.51□□□□□ -1.21
GDE1-204ENST00000569773 LGR6Q9HBX8 967 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 CYP8B1Q9UNU6 501 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 PCDHB5Q9Y5E4 795 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 BCORQ6W2J9 1755 aa7.51□□□□□ -1.21
GDE1-204ENST00000569773 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
GDE1-204ENST00000569773 DLG5Q8TDM6 1919 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 NPC1L1Q9UHC9 1359 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 LMNB1P20700 586 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
GDE1-204ENST00000569773 TGFB2P61812 414 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 DDR1Q08345 913 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 AKAP4Q5JQC9 854 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.5□□□□□ -1.21
GDE1-204ENST00000569773 RHOVQ96L33 236 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 RUSC1Q9BVN2 902 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 SLC52A2Q9HAB3 445 aa7.5□□□□□ -1.21
GDE1-204ENST00000569773 COL11A2P13942 1736 aaPredicted RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 FER1L6Q2WGJ9 1857 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 ARFGEF2Q9Y6D5 1785 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 TNRC6CQ9HCJ0 1690 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 RNMTO43148 476 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 ALX3O95076 343 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 PF4P02776 101 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 DPEP1P16444 411 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 LIG1P18858 919 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 TM4SF1P30408 202 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 RACK1P63244 317 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 RAD51AP2Q09MP3 1159 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 SEPT6Q14141 434 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms