RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 PAGE5Q96GU1 130 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 SBF1O95248 1867 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 DEXIO95424 95 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 GYPCP04921 128 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 PLCD1P51178 756 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 CYP27A1Q02318 531 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 MORC3Q14149 939 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 UBE3CQ15386 1083 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 SF3B3Q15393 1217 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 TMC4Q7Z404 712 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
GINS3-206ENST00000567143 HPS3Q969F9 1004 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 FUT8Q9BYC5 575 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 WDR90Q96KV7 1748 aa7.31□□□□□ -1.24
GINS3-206ENST00000567143 ARAP2Q8WZ64 1704 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 TCRBV5S4A2TA0A5A2 114 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 CTAGE9A4FU28 777 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 USP17L12C9JPN9 530 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 USP17L21D6R901 530 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 MMP10P09238 476 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 TPM1P09493 284 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 ZNF18P17022 549 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 TXLNAP40222 546 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 GPS2Q13227 327 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 NR1I3Q14994 352 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 KRT31Q15323 416 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 SUSD4Q5VX71 490 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 ENAHQ8N8S7 591 aaPredicted RBP7.3□□□□□ -1.24
GINS3-206ENST00000567143 ENOX1Q8TC92 643 aaKnown RBP7.3□□□□□ -1.24
GINS3-206ENST00000567143 LPIN2Q92539 896 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 CRAMP1Q96RY5 1269 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.3□□□□□ -1.24
GINS3-206ENST00000567143 AATFQ9NY61 560 aaKnown RBP eCLIP7.3□□□□□ -1.24
GINS3-206ENST00000567143 RSPH14Q9UHP6 348 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 CSF1RP07333 972 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 PDE6BP35913 854 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 KLK7P49862 253 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 ERVK-24P63145 666 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 PTPROQ16827 1216 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 PRR5LQ6MZQ0 368 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 CAGE1Q8TC20 777 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 WASF1Q92558 559 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 KRT23Q9C075 422 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 VAT1LQ9HCJ6 419 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 SMARCAL1Q9NZC9 954 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 SRP68Q9UHB9 627 aaKnown RBP7.3□□□□□ -1.24
GINS3-206ENST00000567143 DUSP10Q9Y6W6 482 aa7.3□□□□□ -1.24
GINS3-206ENST00000567143 ZNF185O15231 689 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 SERPINB2P05120 415 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 GOLGA8HP0CJ92 632 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 KRT2P35908 639 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 TTC38Q5R3I4 469 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 ANKRD13CQ8N6S4 541 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 SRRTQ9BXP5 876 aaKnown RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 ANKZF1Q9H8Y5 726 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 NIP7Q9Y221 180 aaKnown RBP eCLIP7.29□□□□□ -1.24
GINS3-206ENST00000567143 SRPRBQ9Y5M8 271 aaKnown RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 TIAM2Q8IVF5 1701 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CTAGE15A4D2H0 777 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 PDE8AO60658 829 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 MFAP3LO75121 409 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CTAGE8P0CG41 777 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 KLRK1P26718 216 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CXCR5P32302 372 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 HSP90B2PQ58FF3 399 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 SPATA1Q5VX52 437 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 SRGAP1Q7Z6B7 1085 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CTAGE6Q86UF2 777 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 SGMS1Q86VZ5 419 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 CTAGE4Q8IX94 777 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 NELFBQ8WX92 580 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 RTFDC1Q9BY42 306 aaPredicted RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 LAMA4Q16363 1823 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 ADAMTSL1Q8N6G6 1762 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 MAGEB6P1A0A0J9YX57 407 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
GINS3-206ENST00000567143 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 XBP1P17861 261 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 IGHMBP2P38935 993 aaKnown RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 LIFRP42702 1097 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 RNASE9P60153 205 aaKnown RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 ESR2Q92731 530 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 JADE2Q9NQC1 790 aa7.29□□□□□ -1.24
GINS3-206ENST00000567143 ADD3Q9UEY8 706 aaKnown RBP7.29□□□□□ -1.24
GINS3-206ENST00000567143 A0A1B0GTH6 734 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 CCDC196A0A1B0GTZ2 297 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
GINS3-206ENST00000567143 SRGNP10124 158 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms