RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PRPF38AQ8NAV1 312 aaKnown RBP22.51■■□□□ 1.19
SPSB3-207ENST00000565550 MKL1Q969V6 931 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 FERMT2Q96AC1 680 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 CEP95Q96GE4 821 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 TEX13BQ9BXU2 312 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 MTMR4Q9NYA4 1195 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 PRKAG2Q9UGJ0 569 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 RIPK3Q9Y572 518 aa22.51■■□□□ 1.19
SPSB3-207ENST00000565550 SLC4A3P48751 1232 aa22.5■■□□□ 1.19
SPSB3-207ENST00000565550 SNRNP48Q6IEG0 339 aaKnown RBP22.5■■□□□ 1.19
SPSB3-207ENST00000565550 DEFB123Q8N688 67 aa22.5■■□□□ 1.19
SPSB3-207ENST00000565550 NACAP1Q9BZK3 213 aa22.5■■□□□ 1.19
SPSB3-207ENST00000565550 GREB1LQ9C091 1923 aaPredicted RBP22.5■■□□□ 1.19
SPSB3-207ENST00000565550 COL11A1P12107 1806 aaPredicted RBP22.5■■□□□ 1.19
SPSB3-207ENST00000565550 ZBED4O75132 1171 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 RARBP10826 455 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 ZMYM1Q5SVZ6 1142 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 Q7L0L9 218 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 CPXCR1Q8N123 301 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 KIFC2Q96AC6 838 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 XPNPEP3Q9NQH7 507 aa22.49■■□□□ 1.19
SPSB3-207ENST00000565550 ZNFX1Q9P2E3 1918 aaKnown RBP22.49■■□□□ 1.19
SPSB3-207ENST00000565550 TTLL1O95922 423 aa22.48■■□□□ 1.19
SPSB3-207ENST00000565550 ZNF865P0CJ78 1059 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-207ENST00000565550 TRIM60Q495X7 471 aa22.48■■□□□ 1.19
SPSB3-207ENST00000565550 LRRC47Q8N1G4 583 aaKnown RBP22.48■■□□□ 1.19
SPSB3-207ENST00000565550 NEDD1Q8NHV4 660 aa22.48■■□□□ 1.19
SPSB3-207ENST00000565550 DDX11Q96FC9 970 aa22.48■■□□□ 1.19
SPSB3-207ENST00000565550 NAPBQ9H115 298 aa22.48■■□□□ 1.19
SPSB3-207ENST00000565550 RAVER2Q9HCJ3 691 aaKnown RBP22.48■■□□□ 1.19
SPSB3-207ENST00000565550 CTDP1Q9Y5B0 961 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-207ENST00000565550 ATP2A1O14983 1001 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 PGK1P00558 417 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 TSPY3P0CV98 308 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 TSPY8P0CW00 308 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 PDE4BQ07343 736 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 PPARAQ07869 468 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 SNX17Q15036 470 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 OSBPL3Q9H4L5 887 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 PRDM5Q9NQX1 630 aaPredicted RBP22.47■■□□□ 1.19
SPSB3-207ENST00000565550 FEM1BQ9UK73 627 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 DNAH12Q6ZR08 3092 aa22.47■■□□□ 1.19
SPSB3-207ENST00000565550 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 SLC3A2P08195 630 aaKnown RBP22.46■■□□□ 1.19
SPSB3-207ENST00000565550 TFAP4Q01664 338 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 SLFN13Q68D06 897 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 RNF180Q86T96 592 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 GMCL1P1Q8NEA9 526 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 RILPL2Q969X0 211 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 SLC38A10Q9HBR0 1119 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 SYNPO2Q9UMS6 1093 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 PHF24Q9UPV7 400 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 CNPY2Q9Y2B0 182 aa22.46■■□□□ 1.19
SPSB3-207ENST00000565550 DNAJC25-GNG10A0A024R161 153 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 NEFLP07196 543 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 AKR1A1P14550 325 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 C1orf53Q5VUE5 145 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 MSL3Q8N5Y2 521 aaKnown RBP22.45■■□□□ 1.18
SPSB3-207ENST00000565550 SLC17A8Q8NDX2 589 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 LENG1Q96BZ8 264 aaPredicted RBP22.45■■□□□ 1.18
SPSB3-207ENST00000565550 EVI5LQ96CN4 794 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 SMCHD1A6NHR9 2005 aa22.45■■□□□ 1.18
SPSB3-207ENST00000565550 SNAI1O95863 264 aaPredicted RBP22.44■■□□□ 1.18
SPSB3-207ENST00000565550 BMP3P12645 472 aa22.44■■□□□ 1.18
SPSB3-207ENST00000565550 CCDC129Q6ZRS4 1044 aa22.44■■□□□ 1.18
SPSB3-207ENST00000565550 SH3RF1Q7Z6J0 888 aa22.44■■□□□ 1.18
SPSB3-207ENST00000565550 MTMR10Q9NXD2 777 aa22.44■■□□□ 1.18
SPSB3-207ENST00000565550 PLIN4Q96Q06 1357 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 FOXP2O15409 715 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 GSPT1P15170 499 aaKnown RBP22.43■■□□□ 1.18
SPSB3-207ENST00000565550 TLE2Q04725 743 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 MAMDC4Q6UXC1 1216 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 ANKRD35Q8N283 1001 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 BADQ92934 168 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 INCENPQ9NQS7 918 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 PDLIM7Q9NR12 457 aa22.43■■□□□ 1.18
SPSB3-207ENST00000565550 TRIM43BA6NCK2 446 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 TMEM232C9JQI7 657 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 ADAMTS4O75173 837 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 TRIM43Q96BQ3 446 aaPredicted RBP22.42■■□□□ 1.18
SPSB3-207ENST00000565550 CHMP4CQ96CF2 233 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 FAM227BQ96M60 508 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 ZHX1Q9UKY1 873 aaPredicted RBP22.42■■□□□ 1.18
SPSB3-207ENST00000565550 FAM184BQ9ULE4 1060 aa22.42■■□□□ 1.18
SPSB3-207ENST00000565550 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
SPSB3-207ENST00000565550 A0A0D9SFI3 127 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 OAZ1P54368 228 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 CTDSPL2Q05D32 466 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 SHHQ15465 462 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.41■■□□□ 1.18
SPSB3-207ENST00000565550 ZNF467Q7Z7K2 595 aaPredicted RBP22.41■■□□□ 1.18
SPSB3-207ENST00000565550 CHST13Q8NET6 341 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 CCDC136Q96JN2 1154 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 FBXO40Q9UH90 709 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.41■■□□□ 1.18
SPSB3-207ENST00000565550 PLXNA1Q9UIW2 1896 aa22.41■■□□□ 1.18
SPSB3-207ENST00000565550 A0A1W2PQ45 241 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-207ENST00000565550 A0A1W2PQY0 241 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms