RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 GMCL1P1Q8NEA9 526 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 OSBPL3Q9H4L5 887 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 LTBP2Q14767 1821 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 SLC25A27O95847 323 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
USB1-210ENST00000565151 TAL1P17542 331 aaPredicted RBP17.49■□□□□ 0.39
USB1-210ENST00000565151 PDE4BQ07343 736 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 LRRC26Q2I0M4 334 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 SLFN13Q68D06 897 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 C7orf61Q8IZ16 206 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 MMP19Q99542 508 aa17.49■□□□□ 0.39
USB1-210ENST00000565151 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
USB1-210ENST00000565151 FCER1AP12319 257 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 PDE4AP27815 886 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 CNGA1P29973 690 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 PRPF38AQ8NAV1 312 aaKnown RBP17.48■□□□□ 0.39
USB1-210ENST00000565151 KIFC2Q96AC6 838 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 FGD4Q96M96 766 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 SLC38A10Q9HBR0 1119 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 ZMYND8Q9ULU4 1186 aaPredicted RBP17.48■□□□□ 0.39
USB1-210ENST00000565151 NR2E3Q9Y5X4 410 aa17.48■□□□□ 0.39
USB1-210ENST00000565151 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 SYN1P17600 705 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 SDSP20132 328 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
USB1-210ENST00000565151 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
USB1-210ENST00000565151 RILPL2Q969X0 211 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 IL25Q9H293 177 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
USB1-210ENST00000565151 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 ZNF536O15090 1300 aa17.47■□□□□ 0.39
USB1-210ENST00000565151 TRIM6-TRIM34B2RNG4 842 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 ATP2A1O14983 1001 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 ORC4O43929 436 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 BMP3P12645 472 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 MCCP23508 829 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 HAND2P61296 217 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
USB1-210ENST00000565151 CPXCR1Q8N123 301 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 FEM1BQ9UK73 627 aa17.46■□□□□ 0.39
USB1-210ENST00000565151 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
USB1-210ENST00000565151 SEPT4O43236 478 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
USB1-210ENST00000565151 SNAP25P60880 206 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 GJC2Q5T442 439 aaPredicted RBP17.45■□□□□ 0.38
USB1-210ENST00000565151 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 GDF15Q99988 308 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 MYH6P13533 1939 aa17.45■□□□□ 0.38
USB1-210ENST00000565151 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 RANBP6O60518 1105 aaKnown RBP17.44■□□□□ 0.38
USB1-210ENST00000565151 ZNF865P0CJ78 1059 aaPredicted RBP17.44■□□□□ 0.38
USB1-210ENST00000565151 SLC4A3P48751 1232 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 RCSD1Q6JBY9 416 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 KCTD1Q719H9 257 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
USB1-210ENST00000565151 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 LENG1Q96BZ8 264 aaPredicted RBP17.44■□□□□ 0.38
USB1-210ENST00000565151 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
USB1-210ENST00000565151 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
USB1-210ENST00000565151 ZMYM6O95789 1325 aa17.44■□□□□ 0.38
USB1-210ENST00000565151 COL6A3P12111 3177 aa17.43■□□□□ 0.38
USB1-210ENST00000565151 SNAI1O95863 264 aaPredicted RBP17.43■□□□□ 0.38
USB1-210ENST00000565151 KCTD2Q14681 263 aa17.43■□□□□ 0.38
USB1-210ENST00000565151 TTBK2Q6IQ55 1244 aa17.43■□□□□ 0.38
USB1-210ENST00000565151 AGBL1Q96MI9 1066 aa17.43■□□□□ 0.38
USB1-210ENST00000565151 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
USB1-210ENST00000565151 DNM1LO00429 736 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
USB1-210ENST00000565151 ADCY6O43306 1168 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 MSCO60682 206 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 ZBED4O75132 1171 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
USB1-210ENST00000565151 IRX5P78411 483 aaPredicted RBP17.42■□□□□ 0.38
USB1-210ENST00000565151 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
USB1-210ENST00000565151 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 ASTN1O14525 1302 aa17.42■□□□□ 0.38
USB1-210ENST00000565151 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
USB1-210ENST00000565151 COPB2P35606 906 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 SLC1A4P43007 532 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 MAGEA10P43363 369 aaPredicted RBP17.41■□□□□ 0.38
USB1-210ENST00000565151 LRRC41Q15345 812 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 CWC27Q6UX04 472 aaKnown RBP17.41■□□□□ 0.38
USB1-210ENST00000565151 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 DDX49Q9Y6V7 483 aaKnown RBP17.41■□□□□ 0.38
USB1-210ENST00000565151 NEDD4P46934 1319 aa17.41■□□□□ 0.38
USB1-210ENST00000565151 PLA2G6O60733 806 aa17.4■□□□□ 0.38
USB1-210ENST00000565151 STAT2P52630 851 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms