RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 BMP3P12645 472 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 OAZ1P54368 228 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 PDE1AP54750 535 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 TFAP4Q01664 338 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
SPG11-219ENST00000559822 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 LRRC47Q8N1G4 583 aaKnown RBP14.56□□□□□ -0.08
SPG11-219ENST00000559822 KIFC2Q96AC6 838 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 DDX11Q96FC9 970 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 LBHD1Q9BQE6 289 aaPredicted RBP14.56□□□□□ -0.08
SPG11-219ENST00000559822 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 FBXO40Q9UH90 709 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 PLXNA1Q9UIW2 1896 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
SPG11-219ENST00000559822 AKR1A1P14550 325 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
SPG11-219ENST00000559822 RTP1P59025 263 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 FAM47AQ5JRC9 791 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 PRAMEF19Q5SWL8 479 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 ANO1Q5XXA6 986 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 GPR153Q6NV75 609 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 RNF180Q86T96 592 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 CHST13Q8NET6 341 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 SLC38A10Q9HBR0 1119 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 XPNPEP3Q9NQH7 507 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 ISY1Q9ULR0 285 aaKnown RBP14.55□□□□□ -0.08
SPG11-219ENST00000559822 SYNGAP1Q96PV0 1343 aa14.55□□□□□ -0.08
SPG11-219ENST00000559822 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 STAT2P52630 851 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 LRRC41Q15345 812 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPG11-219ENST00000559822 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
SPG11-219ENST00000559822 ANKRD35Q8N283 1001 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 GMCL1Q96IK5 515 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 ANAPC4Q9UJX5 808 aa14.54□□□□□ -0.08
SPG11-219ENST00000559822 SLC1A4P43007 532 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 MDM2Q00987 491 aaPredicted RBP14.53□□□□□ -0.08
SPG11-219ENST00000559822 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
SPG11-219ENST00000559822 ALX1Q15699 326 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 SLC39A5Q6ZMH5 540 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
SPG11-219ENST00000559822 RAVER2Q9HCJ3 691 aaKnown RBP14.53□□□□□ -0.08
SPG11-219ENST00000559822 STX8Q9UNK0 236 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 ATP11BQ9Y2G3 1177 aa14.53□□□□□ -0.08
SPG11-219ENST00000559822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.53□□□□□ -0.08
SPG11-219ENST00000559822 DNAJC25-GNG10A0A024R161 153 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 TMEM232C9JQI7 657 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.09
SPG11-219ENST00000559822 RANBP6O60518 1105 aaKnown RBP14.52□□□□□ -0.09
SPG11-219ENST00000559822 PLA2G6O60733 806 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 ZNF865P0CJ78 1059 aaPredicted RBP14.52□□□□□ -0.09
SPG11-219ENST00000559822 ADCYAP1R1P41586 468 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 SNX17Q15036 470 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 MCMDC2Q4G0Z9 681 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 C1orf53Q5VUE5 145 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 STAG1Q8WVM7 1258 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 LRCH3Q96II8 777 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 FAM184BQ9ULE4 1060 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 PHF24Q9UPV7 400 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 RIPK3Q9Y572 518 aa14.52□□□□□ -0.09
SPG11-219ENST00000559822 ZMYM6O95789 1325 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 ORC4O43929 436 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
SPG11-219ENST00000559822 CTDSPL2Q05D32 466 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 TKFCQ3LXA3 575 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 YTHDC1Q96MU7 727 aaKnown RBP14.51□□□□□ -0.09
SPG11-219ENST00000559822 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 ACAD9Q9H845 621 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 TOMM22Q9NS69 142 aa14.51□□□□□ -0.09
SPG11-219ENST00000559822 FOXP2O15409 715 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 PGK1P00558 417 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
SPG11-219ENST00000559822 MCCP23508 829 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 TRIM60Q495X7 471 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 RCSD1Q6JBY9 416 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 TSEN34Q9BSV6 310 aaKnown RBP14.5□□□□□ -0.09
SPG11-219ENST00000559822 ABHD16BQ9H3Z7 469 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 SPC25Q9HBM1 224 aa14.5□□□□□ -0.09
SPG11-219ENST00000559822 PRDM5Q9NQX1 630 aaPredicted RBP14.5□□□□□ -0.09
SPG11-219ENST00000559822 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
SPG11-219ENST00000559822 SMCHD1A6NHR9 2005 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 A0A0D9SFI3 127 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 MOXD2PA6NHM9 499 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 FGRP09769 529 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 PCP11498 1178 aaKnown RBP14.49□□□□□ -0.09
SPG11-219ENST00000559822 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 DCAF4Q8WV16 495 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 FAM227BQ96M60 508 aa14.49□□□□□ -0.09
SPG11-219ENST00000559822 IL17RBQ9NRM6 502 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms