RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CACNB2Q08289 660 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-205ENST00000558700 CCL14Q16627 93 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 SBK1Q52WX2 424 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 CTR9Q6PD62 1173 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 C11orf49Q9H6J7 331 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 A0A1W2PPC1 479 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
TRAF3-205ENST00000558700 GPAA1O43292 621 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 STRNO43815 780 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 TDO2P48775 406 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 ATP2B2Q01814 1243 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 PLS1Q14651 629 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 TSHZ3Q63HK5 1081 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 C7orf61Q8IZ16 206 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 SPICE1Q8N0Z3 855 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 ATG4CQ96DT6 458 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
TRAF3-205ENST00000558700 MOV10L1Q9BXT6 1211 aaKnown RBP9.63□□□□□ -0.87
TRAF3-205ENST00000558700 MROH8Q9H579 483 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-205ENST00000558700 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
TRAF3-205ENST00000558700 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
TRAF3-205ENST00000558700 ERCC3P19447 782 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 MX1P20591 662 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 ADORA2AP29274 412 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 CCND3P30281 292 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-205ENST00000558700 COPB2P35606 906 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 KIAA1755Q5JYT7 1200 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 OLFML2BQ68BL8 750 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 DPP9Q86TI2 863 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 OSBP2Q969R2 916 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 FSD1Q9BTV5 496 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 NACAP1Q9BZK3 213 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 MKNK2Q9HBH9 465 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-205ENST00000558700 RBM27Q9P2N5 1060 aaKnown RBP9.62□□□□□ -0.87
TRAF3-205ENST00000558700 PLIN4Q96Q06 1357 aa9.62□□□□□ -0.87
TRAF3-205ENST00000558700 PFASO15067 1338 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 MINDY4BA8MYZ0 360 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 M0R2C6 588 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 SLC25A27O95847 323 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 APPP05067 770 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 CYBAP13498 195 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 RASA1P20936 1047 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 SIAH1Q8IUQ4 282 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 NPLOC4Q8TAT6 608 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 PI4K2BQ8TCG2 481 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 NYAP2Q9P242 653 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 DDX20Q9UHI6 824 aaKnown RBP9.61□□□□□ -0.87
TRAF3-205ENST00000558700 PPP1R9AQ9ULJ8 1098 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
TRAF3-205ENST00000558700 SLC3A2P08195 630 aaKnown RBP9.6□□□□□ -0.87
TRAF3-205ENST00000558700 COL6A1P12109 1028 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 FCER1AP12319 257 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 CNGA1P29973 690 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 CYP2C19P33261 490 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 FAM83BQ5T0W9 1011 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 LHX8Q68G74 356 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
TRAF3-205ENST00000558700 SLF1Q9BQI6 1058 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 NAPBQ9H115 298 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
TRAF3-205ENST00000558700 SYNPO2Q9UMS6 1093 aa9.6□□□□□ -0.87
TRAF3-205ENST00000558700 ZNFX1Q9P2E3 1918 aaKnown RBP9.6□□□□□ -0.87
TRAF3-205ENST00000558700 DNM1LO00429 736 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 VWA5AO00534 786 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 PDE4BQ07343 736 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 KCTD2Q14681 263 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 TMEM132BQ14DG7 1078 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 ZMYM1Q5SVZ6 1142 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 RIOX2Q8IUF8 465 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 STK11IPQ8N1F8 1099 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 OTUD7AQ8TE49 926 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-205ENST00000558700 MMP19Q99542 508 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAF3-205ENST00000558700 TEX13BQ9BXU2 312 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-205ENST00000558700 FBXO28Q9NVF7 368 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
TRAF3-205ENST00000558700 LTBP2Q14767 1821 aa9.59□□□□□ -0.88
TRAF3-205ENST00000558700 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 IGKV6D-41A0A0C4DH26 115 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 KBTBD13C9JR72 458 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 SEPT4O43236 478 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 COBLO75128 1261 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 TTLL1O95922 423 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 NDUFB10O96000 172 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms