RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 RIPK3Q9Y572 518 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 ARVCFO00192 962 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 PRKAB2O43741 272 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 CD4P01730 458 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 ASGR1P07306 291 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 EEF2P13639 858 aaKnown RBP15.2■□□□□ 0.02
PSEN1-221ENST00000557293 IGFBP4P22692 258 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 SLC9C2Q5TAH2 1124 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 FAM126BQ8IXS8 530 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 MSL3Q8N5Y2 521 aaKnown RBP15.2■□□□□ 0.02
PSEN1-221ENST00000557293 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
PSEN1-221ENST00000557293 VWCEQ96DN2 955 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 FGD4Q96M96 766 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
PSEN1-221ENST00000557293 PPP1R9AQ9ULJ8 1098 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 CNPY2Q9Y2B0 182 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 BDP1A6H8Y1 2624 aa15.2■□□□□ 0.02
PSEN1-221ENST00000557293 ZNF532Q9HCE3 1301 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 TCF20Q9UGU0 1960 aaKnown RBP15.19■□□□□ 0.02
PSEN1-221ENST00000557293 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 CYP2C18P33260 490 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 CDK8P49336 464 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 SLFNL1Q499Z3 407 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 TMEM199Q8N511 208 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
PSEN1-221ENST00000557293 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 GJA9P57773 515 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 NKX3-2P78367 333 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 ACVR2BQ13705 512 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 C12orf60Q5U649 245 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 PSRC1Q6PGN9 363 aaPredicted RBP15.18■□□□□ 0.02
PSEN1-221ENST00000557293 SLC43A3Q8NBI5 491 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 GLT1D1Q96MS3 346 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
PSEN1-221ENST00000557293 SH2D4AQ9H788 454 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 MSRAQ9UJ68 235 aa15.18■□□□□ 0.02
PSEN1-221ENST00000557293 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 MROH7Q68CQ1 1323 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 A0A0U1RQG5 324 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-221ENST00000557293 FGBP02675 491 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 TFF2Q03403 129 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 RAB30Q15771 203 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 FAM83BQ5T0W9 1011 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-221ENST00000557293 AACSQ86V21 672 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
PSEN1-221ENST00000557293 KATNBL1Q9H079 304 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 ZHX1Q9UKY1 873 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-221ENST00000557293 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
PSEN1-221ENST00000557293 C6orf222P0C671 652 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-221ENST00000557293 COPB2P35606 906 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.16■□□□□ 0.02
PSEN1-221ENST00000557293 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 EPHX3Q9H6B9 360 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 SLC28A3Q9HAS3 691 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-221ENST00000557293 ASTN1O14525 1302 aa15.16■□□□□ 0.02
PSEN1-221ENST00000557293 CHD7Q9P2D1 2997 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 GBF1Q92538 1859 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 USP17L21D6R901 530 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 CHGBP05060 677 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 MYOGP15173 224 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 KCNQ1P51787 676 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 RABGGTBP53611 331 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 TTF1Q15361 905 aaPredicted RBP15.15■□□□□ 0.02
PSEN1-221ENST00000557293 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 DDX11Q96FC9 970 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
PSEN1-221ENST00000557293 LRFN3Q9BTN0 628 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 C1QTNF1Q9BXJ1 281 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 EXOC6BQ9Y2D4 811 aa15.15■□□□□ 0.02
PSEN1-221ENST00000557293 GOLIM4O00461 696 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
PSEN1-221ENST00000557293 BEX3Q00994 111 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 ZKSCAN2Q63HK3 967 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
PSEN1-221ENST00000557293 OTOP2Q7RTS6 562 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 ABHD16BQ9H3Z7 469 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
PSEN1-221ENST00000557293 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-221ENST00000557293 RFXAPO00287 272 aa15.13■□□□□ 0.01
PSEN1-221ENST00000557293 TLR3O15455 904 aaKnown RBP15.13■□□□□ 0.01
PSEN1-221ENST00000557293 RLBP1P12271 317 aa15.13■□□□□ 0.01
PSEN1-221ENST00000557293 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
PSEN1-221ENST00000557293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.13■□□□□ 0.01
PSEN1-221ENST00000557293 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms