RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 PPARAQ07869 468 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 ANKRD45Q5TZF3 282 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 CPXCR1Q8N123 301 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 RIPK3Q9Y572 518 aa18.91■□□□□ 0.62
TUBB3-213ENST00000557262 RARBP10826 455 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 ADCYAP1R1P41586 468 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 TFAP4Q01664 338 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 MSL3Q8N5Y2 521 aaKnown RBP18.9■□□□□ 0.62
TUBB3-213ENST00000557262 GMCL1P1Q8NEA9 526 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 ATP11BQ9Y2G3 1177 aa18.9■□□□□ 0.62
TUBB3-213ENST00000557262 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-213ENST00000557262 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-213ENST00000557262 SLC4A3P48751 1232 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 SLFN13Q68D06 897 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 SLC38A10Q9HBR0 1119 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 RAVER2Q9HCJ3 691 aaKnown RBP18.89■□□□□ 0.61
TUBB3-213ENST00000557262 XPNPEP3Q9NQH7 507 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 SALL3Q9BXA9 1300 aa18.89■□□□□ 0.61
TUBB3-213ENST00000557262 DNAJC25-GNG10A0A024R161 153 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 FDX1P10109 184 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 BMP3P12645 472 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 AKR1A1P14550 325 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 SNX17Q15036 470 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 C1orf53Q5VUE5 145 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 RNF180Q86T96 592 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 LRRC47Q8N1G4 583 aaKnown RBP18.88■□□□□ 0.61
TUBB3-213ENST00000557262 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
TUBB3-213ENST00000557262 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
TUBB3-213ENST00000557262 COL6A3P12111 3177 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 OAZ1P54368 228 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 MAMDC4Q6UXC1 1216 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 CCDC129Q6ZRS4 1044 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.87■□□□□ 0.61
TUBB3-213ENST00000557262 CHST13Q8NET6 341 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 PLIN4Q96Q06 1357 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 FBXO40Q9UH90 709 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 PHF24Q9UPV7 400 aa18.87■□□□□ 0.61
TUBB3-213ENST00000557262 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 PGK1P00558 417 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 PDE1AP54750 535 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
TUBB3-213ENST00000557262 TRIM60Q495X7 471 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 ZNF467Q7Z7K2 595 aaPredicted RBP18.86■□□□□ 0.61
TUBB3-213ENST00000557262 ANKRD35Q8N283 1001 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 DEFB123Q8N688 67 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 CHURC1Q8WUH1 139 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
TUBB3-213ENST00000557262 MYH4Q9Y623 1939 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 FOXP2O15409 715 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 CTDSPL2Q05D32 466 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 STAG1Q8WVM7 1258 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 GMCL1Q96IK5 515 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 INCENPQ9NQS7 918 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
TUBB3-213ENST00000557262 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.85■□□□□ 0.61
TUBB3-213ENST00000557262 PLXNA1Q9UIW2 1896 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 TSPY2A6NKD2 308 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 MCCP23508 829 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 SLC1A4P43007 532 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 STAT2P52630 851 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 ALX1Q15699 326 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 TSEN34Q9BSV6 310 aaKnown RBP18.84■□□□□ 0.61
TUBB3-213ENST00000557262 PRDM5Q9NQX1 630 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-213ENST00000557262 IL17RBQ9NRM6 502 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 ANAPC4Q9UJX5 808 aa18.84■□□□□ 0.61
TUBB3-213ENST00000557262 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
TUBB3-213ENST00000557262 LAMA2P24043 3122 aaKnown RBP18.83■□□□□ 0.61
TUBB3-213ENST00000557262 PLA2G6O60733 806 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 TLE2Q04725 743 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 VPS53Q5VIR6 699 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 RCSD1Q6JBY9 416 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 Q7L0L9 218 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 TACC3Q9Y6A5 838 aa18.83■□□□□ 0.6
TUBB3-213ENST00000557262 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
TUBB3-213ENST00000557262 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-213ENST00000557262 AAMPQ13685 434 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 ACVR2BQ13705 512 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 SH3RF1Q7Z6J0 888 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 BADQ92934 168 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 ABHD16BQ9H3Z7 469 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 PDLIM7Q9NR12 457 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 MTMR10Q9NXD2 777 aa18.82■□□□□ 0.6
TUBB3-213ENST00000557262 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-213ENST00000557262 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-213ENST00000557262 A0A1W2PQ45 241 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-213ENST00000557262 A0A1W2PQY0 241 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms